DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-B and Adamts4

DIOPT Version :9

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_076449.1 Gene:Adamts4 / 66015 RGDID:621242 Length:851 Species:Rattus norvegicus


Alignment Length:926 Identity:276/926 - (29%)
Similarity:394/926 - (42%) Gaps:206/926 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RWLGLLLHYWLVVVTQGGGVRPLYGLHSDELVAGE---GQLVVPRRVHPDGAFMTHQLEYAHELD 72
            ||..|||...|:.:.......|    ..:|:|..|   |..::|      |:.:..:|.|.    
  Rat    48 RWQQLLLLASLLPLAWSASPLP----REEEIVFPEKLNGSSIIP------GSGVPARLLYR---- 98

  Fly    73 HRRHRQRRSLNSEHDTQAADLHLLLPLANETLHLELMAHSYFLAPNLVVERHRRDLRTRSPLTTR 137
                                    ||...|.|.|||...     |.:.||          .||.:
  Rat    99 ------------------------LPAFGEILLLELEQD-----PGVQVE----------GLTVQ 124

  Fly   138 HL------------NCHFHGKVRGQPATNVAISTCAG-LVGHIRTAGNEYFIEPSKEHEPHPVNG 189
            :|            ..:..|.:.|.|.:..::....| |:|.::..|.|..::|.:....:...|
  Rat   125 YLGQAPEMLGGAEPGTYLTGTINGDPESVASLHWDRGALLGVLQYRGAELHLQPLEGGALNSAGG 189

  Fly   190 HPHVVFQRSSVKPKHSLRKRNKRKRGGKSGSGAEVSNCGTREPRRRMETRLEWQARGKVKVQGGR 254
                       ...|.||:::.....|      .:.|                     ||...| 
  Rat   190 -----------PGAHILRRKSPASNRG------PICN---------------------VKAPSG- 215

  Fly   255 QIRRHHHHHHHHHHKHKYRHHQQKISRVPHTKFKYETQFQTEPDHAEIPRRRRSISSPRHVETLI 319
                                ....|||                      |.:|..|..|.||||:
  Rat   216 --------------------SPSPISR----------------------RNKRFASLSRFVETLV 238

  Fly   320 VADATMSAFH-RDLNGYLLTIMNMVSALYKDPSIGNSIEIVVVRIIQLDEEESQLQLNLTQNAQK 383
            |||..|:||| ..|..||||:|...:..:|.|||.|.:.:||.|::.|...:...|:.  .:|.:
  Rat   239 VADDKMAAFHGAGLKHYLLTVMAAAAKAFKHPSIRNPVNLVVTRLVILGSGQEVPQVG--PSAAQ 301

  Fly   384 NLDRFCSWQHKLNKGSEKDPHHHDVAILITRKNIC-ANNCMTLGLANVGGMCKPKQSCSVNEDNG 447
            .|..||:||..||..::.||.|.|.|||.||:::| .:.|..||:|.||.:|.|.:||::.||:|
  Rat   302 TLRSFCTWQKGLNPPNDSDPDHFDTAILFTRQDLCGVSTCDALGMAGVGTVCDPARSCAIVEDDG 366

  Fly   448 IMLSHTITHELGHNFGMFHDTAK-------IGCHPRVGPIVHIMTPTFGADTLQVCWSNCSRKYI 505
            :..:.|..|||||.|.|.||.:|       .|...|     |:|.|.......:..||.||.::|
  Rat   367 LQSAFTAAHELGHVFNMLHDNSKPCANLNGQGSSSR-----HVMAPVMAHVDPEEPWSPCSARFI 426

  Fly   506 THFLDQGLGEC-LDDPPTPLDEYNYTGELPGMRYNARGQCRLQFNLTTDSEVGACSAPHEFCSTL 569
            |.|||.|.|.| ||.|..||   :.....||..|:|..||:|.|.  .||  ..|......|:.|
  Rat   427 TDFLDNGYGHCLLDKPEAPL---HLPVTFPGKDYDADRQCQLTFG--PDS--SHCPQLPPPCAAL 484

  Fly   570 WC--KVNGE--CVTHMRPTAPGTLCGRNKWCQNGKCVRREELAAVN----GGWGDWSEWSECSRS 626
            ||  .:||.  |.|...|.|.||.||..:.|..|:|:..::|...|    ||||.|..|.:|||:
  Rat   485 WCFGHLNGHAMCQTKHSPWADGTPCGPAQACMGGRCLHVDQLKDFNIPQAGGWGPWGPWGDCSRT 549

  Fly   627 CGGGVSTQQRECDNPVPANGGVFCIGERKRYKICRKRPCP-AEEPSFRAQQCARFDN-----VSY 685
            |||||....|:|..|||.|||.:|.|.|..::.|..:.|| ....:||.:|||.:::     .|:
  Rat   550 CGGGVQFSSRDCTKPVPRNGGKYCEGRRTPFRSCNTKNCPHGSALTFREEQCAAYNHRTDLFKSF 614

  Fly   686 QGATYKWLPFFDKNNP---CKLFCSDVDDTIIANWGATVLDGTPCTLGTNNMCIDGICKKVGCDW 747
            .| ...|:|.:....|   |||.|..............|.|||||:..::::|:.|.|...|||.
  Rat   615 PG-PMDWVPRYTGVAPRDQCKLTCQARALGYYYVLEPRVADGTPCSPDSSSVCVQGRCIHAGCDR 678

  Fly   748 IVDSEVQDDRCGVCGGSGDQCQPVRETYTDPFAAKDGAYVEIVTIPARARHILIRELANS---PH 809
            |:.|:.:.|:|.||||:|..|    ...:..|......|.::|||||...|||:|:...|   ..
  Rat   679 IIGSKKKFDKCMVCGGNGSSC----SKQSGSFKKFRYGYSDVVTIPAGRTHILVRQQGGSGLKSI 739

  Fly   810 FLAIATGDGGDRFYLNGDSLISMPGEFEIA--GAESL-YD-RVDEQETITIPQPIQHSISLYAIV 870
            :||:...||.  :.|||:..: ||...::.  ||.|| |. |....||::...|:...::|..:|
  Rat   740 YLALKLADGS--YALNGEYTL-MPSSTDVVLPGAVSLRYSGRTAASETLSGHGPLAQPLTLQVLV 801

  Fly   871 RGNESNAGIFYEFTLP 886
            .||..|..:.|.|.:|
  Rat   802 AGNPQNVRLRYSFFVP 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 78..194 CDD:279848 23/128 (18%)
ZnMc_ADAMTS_like 314..518 CDD:239801 86/213 (40%)
Reprolysin 315..521 CDD:279729 88/215 (41%)
ADAM_CR <558..602 CDD:301627 17/47 (36%)
TSP1 614..666 CDD:214559 24/51 (47%)
ADAM_spacer1 773..886 CDD:283607 37/119 (31%)
TSP1 901..956 CDD:214559
Adamts4NP_076449.1 Pep_M12B_propep 92..195 CDD:279848 26/156 (17%)
Reprolysin 232..442 CDD:279729 89/216 (41%)
ZnMc_ADAMTS_like 232..439 CDD:239801 87/213 (41%)
ADAM_CR 452..523 CDD:301627 28/74 (38%)
TSP1 545..589 CDD:214559 20/43 (47%)
ADAM_spacer1 701..816 CDD:283607 37/117 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D125522at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100241
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.720

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