DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AdamTS-B and si:ch211-267e7.3

DIOPT Version :9

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:XP_696251.5 Gene:si:ch211-267e7.3 / 567853 ZFINID:ZDB-GENE-070912-265 Length:963 Species:Danio rerio


Alignment Length:363 Identity:115/363 - (31%)
Similarity:169/363 - (46%) Gaps:65/363 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   554 SEVGACSAPHEFCSTLWCKVNGECVTHMRPTAPGTLCGRNKWCQNGKCVRREELA----AVNGGW 614
            :.||....|: |...:|. :|.....:::.::.|                ||:|.    .|...|
Zfish     7 ARVGHTLLPY-FLIHVWI-INTAAGVNVKDSSEG----------------REDLQRHPDEVAQWW 53

  Fly   615 GDWSEWSECSRSCGGGVSTQQREC-DNPVPANGGV---FCIGERKRYKICRKRPCPAEEPSFRAQ 675
            |:||.||.|||:|||||.:|:|.| ...:.:...:   ||||..|:|::|..:|||....||:..
Zfish    54 GEWSSWSTCSRTCGGGVRSQERHCLQQRLTSTQNINSSFCIGPSKQYQLCTNQPCPNSRISFKQH 118

  Fly   676 QCARFDNVSYQGATYKWLPFFD------KNNPCKLFCSDVDDTIIANWGATVL-----DGTPCTL 729
            ||::|:..::....|:|:|.:.      .|.||.|.|:       ...|...|     |||.|..
Zfish   119 QCSQFNAKAFSRKHYEWVPLYPDDYINISNKPCDLQCT-------TTTGERQLLVPAHDGTFCRD 176

  Fly   730 GT-NNMCIDGICKKVGCDWIVDSEVQDDRCGVCGGSGDQCQPVRETYTDPFAAKDG----AYVEI 789
            |. ..:||:|.|:.||||..:.|....|:||||||:|..|..|..||      :.|    .||.|
Zfish   177 GIYQGVCIEGQCQVVGCDGKLYSSKTIDKCGVCGGNGASCYRVSGTY------RKGITQLGYVFI 235

  Fly   790 VTIPARARHILIRELANSPHFLAIATGDGGDRFYLNGDSLISMPGEFEIAGAESLYDR-----VD 849
            ..||..|..|.|.|...:.:.||::  |....|:.||:|:|..|..|.:||....|.|     .|
Zfish   236 TNIPVGATDIQIIERRKTENILALS--DEAGHFFFNGNSVIDNPQNFHVAGTVFKYRRPANLFSD 298

  Fly   850 EQETITIPQPIQHSIS-LYAIVRGNESNAGIFYEFTLP 886
            ..|.|....|.|.::: :|..:.|...:  |.||:|:|
Zfish   299 GFEYIMAQGPTQQALNVMYYNLNGKMPH--ITYEYTVP 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 78..194 CDD:279848
ZnMc_ADAMTS_like 314..518 CDD:239801
Reprolysin 315..521 CDD:279729
ADAM_CR <558..602 CDD:301627 5/43 (12%)
TSP1 614..666 CDD:214559 25/55 (45%)
ADAM_spacer1 773..886 CDD:283607 37/122 (30%)
TSP1 901..956 CDD:214559
si:ch211-267e7.3XP_696251.5 TSP1 53..109 CDD:214559 25/55 (45%)
ADAM_spacer1 217..334 CDD:283607 38/126 (30%)
TSP1 637..>660 CDD:214559
TSP1 700..749 CDD:214559
TSP1 752..806 CDD:214559
TSP1 865..918 CDD:214559
PLAC 928..959 CDD:285849
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.