DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-B and adgrb1a

DIOPT Version :9

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:XP_009290826.1 Gene:adgrb1a / 563527 ZFINID:ZDB-GENE-060607-12 Length:1610 Species:Danio rerio


Alignment Length:705 Identity:138/705 - (19%)
Similarity:205/705 - (29%) Gaps:260/705 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 CSWQHKLNKGSEKDPHHHDVAILITRKNICANNCMTLGLANVGGMCKPKQSCSVNE------DNG 447
            |:|..:     ..||..:.:.|.:|                     ||.:.|...:      |:.
Zfish    62 CTWTLQ-----NPDPRRYTIFIKVT---------------------KPTRDCIARQHRTFQFDSF 100

  Fly   448 IMLSHTITHELGHNFGM--FHDTAKIGCHPRVGPIVHIMTPTFGADTLQVCWSNCSRKYITHFLD 510
            :..:.|.       .||  |.:..|: |...    .|:.....|...||:      ||.:..   
Zfish   101 LETTRTF-------LGMESFDEVVKL-CDAS----THVAFLEAGKQFLQI------RKGLPR--- 144

  Fly   511 QGLGECLDDPPTPLDEYNYTGELPGMRYNARGQCRLQFNLTTDSEVGACSAPHEFCSTLWCKVNG 575
            .|.|.                      .|..|:.::::.:     ||..:.....|..| |:...
Zfish   145 AGAGS----------------------RNGDGEFKVEYLV-----VGKRNPSMAACQML-CQWLE 181

  Fly   576 ECVTHMRPTAPGTLCGRNK-----WCQ-------NGKCVR------------REELAAV--NGGW 614
            :|:|:...|.|   ||..:     |.|       || |.|            :|..:..  :|||
Zfish   182 DCLTYSSSTRP---CGIMQTPCQCWDQPPLDKESNG-CYRDGVFLENCIPVVKEGASETDNSGGW 242

  Fly   615 GDWSEWSECSRSCGGGVSTQQRECDNPVPANGGVFCIGERKRYKICRKRPCPA-EEPSFRAQQCA 678
            ..|..|:|||..|||||..:.|.|.:  |.:....|.|..:..:.|..:||.. .:.|.:.|   
Zfish   243 SGWGNWAECSSECGGGVQKRTRNCQS--PPDEAYLCEGVLEEGRPCNAQPCIGYRQYSSKGQ--- 302

  Fly   679 RFDNVSYQGATYKWL--------------------PFFDKNNPCKLFCSDVDDTIIANWGATVLD 723
            ....|.|:|.....|                    ...||....:.....||......|.|..:.
Zfish   303 GLSPVKYKGMQEAMLGKGRLGSRSQSLRSVDSRKREDSDKTRSGQQSSQTVDSPSGEEWSAWSVC 367

  Fly   724 GTPCTLG---TNNMCIDGICKKVGCDWIVDSEVQDDRCGVCGGSGDQCQPVRETYTDPFA--AKD 783
            ...|..|   ....|:.           |....|      |.|...:.:|...|...|.|  .:.
Zfish   368 SATCGEGWQSRTRFCVS-----------VSYSTQ------CSGPLREQRPCNNTAVCPAALITEH 415

  Fly   784 GAYVEIVTIPARARHILIRELANSPHFLAIATGDGGDRFYLNGDSLISMPGEFEIAGAESLYDRV 848
            ||:.|.                 :|..|..:|...|.|                           
Zfish   416 GAWGEW-----------------TPWSLCSSTCGRGYR--------------------------- 436

  Fly   849 DEQETITIPQ----PIQHSISLYAIVRGNESNAGIFYEFTLPALNVTAGRQFQWRLSNWTACSAS 909
            :...:...||    |..          |.|...    :|...|:....|...:|  |.|::||::
Zfish   437 ERNRSCKPPQFGGNPCD----------GPEKQT----KFCNIAVCPVDGVWNEW--SGWSSCSST 485

  Fly   910 CGGGVQHREPICQENGKALGDTLPC---WTHAKNKRPARQSRGCGDQPCP--AHW--WPGPWQFC 967
            |..|...|...|  ||.:.|. |.|   |         .::|.|..:.||  ..|  | ..|..|
Zfish   486 CSNGTMQRIREC--NGPSYGG-LECQGEW---------HETRDCFLRECPVDGQWQLW-STWSGC 537

  Fly   968 PVTCRPVGFVAPPQRRR--------SVVCLDEHDVVVADAECGHLQKPAEMEPCE 1014
            ..||..    ...||:|        ...|..:.:.|   ..|...:.|...|.|:
Zfish   538 TKTCGG----GSQQRQRLCYGPFFGGEACPGDREEV---RRCNEKRCPEPHEICD 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 78..194 CDD:279848
ZnMc_ADAMTS_like 314..518 CDD:239801 24/136 (18%)
Reprolysin 315..521 CDD:279729 24/139 (17%)
ADAM_CR <558..602 CDD:301627 13/55 (24%)
TSP1 614..666 CDD:214559 18/51 (35%)
ADAM_spacer1 773..886 CDD:283607 17/118 (14%)
TSP1 901..956 CDD:214559 16/57 (28%)
adgrb1aXP_009290826.1 TSP1 242..291 CDD:214559 17/50 (34%)
TSP1 360..408 CDD:214559 11/64 (17%)
TSP1 418..468 CDD:214559 13/107 (12%)
TSP1 473..523 CDD:214559 17/63 (27%)
TSP1 528..578 CDD:214559 12/57 (21%)
HRM 580..646 CDD:295297 2/6 (33%)
GAIN 665..860 CDD:293098
GPS 886..930 CDD:280071
7tm_4 944..1211 CDD:304433
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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