DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-B and paplna

DIOPT Version :9

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:XP_005169942.1 Gene:paplna / 562930 ZFINID:ZDB-GENE-070815-4 Length:1187 Species:Danio rerio


Alignment Length:500 Identity:151/500 - (30%)
Similarity:217/500 - (43%) Gaps:100/500 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   607 LAAVNGGWGDWSEWSECSRSCGGGVSTQQRECDNPVPANGGVFCIGERKRYKICRKRPCPAEEPS 671
            :..:...||:||.:.||||||||||:.:.|.|... ..:||..|:|..|.|:.|..:.||.....
Zfish    17 MQGIGDNWGEWSSYGECSRSCGGGVTMRTRRCVTH-RTDGGHSCVGPDKSYRSCNIQDCPEGSRD 80

  Fly   672 FRAQQCARFDNVSYQGATYKWLPFFDKNNPCKLFCSDVDDTIIANWGATVLDGTPCTLGTNNMCI 736
            ||.:||::||...:||..|||||::...|||:|.|....:.......::|:|||||..|..::|:
Zfish    81 FREEQCSQFDGTDFQGKRYKWLPYYGGENPCELNCIPRGENFYYRQKSSVVDGTPCRPGGKDICV 145

  Fly   737 DGICKKVGCDWIVDSEVQDDRCGVCGGSGDQCQPVRETYTDPFAAKDGAYVEIVTIPARARHILI 801
            ||:||::|||.:::|..::|.|..|||.|..|..::.:::.....|  .|.::..||..|..|.|
Zfish   146 DGLCKRLGCDHMLESPQEEDACLQCGGDGQSCSRLKNSFSMRNLPK--GYNQMFIIPVGATTISI 208

  Fly   802 RELANSPHFLAIATGDGGDRFYLNGDSLISMPGEFEIAGAESLYDRVDE----QETITIPQPIQH 862
            :|...:.::|||....|  .:||||..:|.:.....|||....|.|..|    .|.||...|...
Zfish   209 KETLPTRNYLAIKNLRG--EYYLNGHWVIDLSRAASIAGTVLHYQRGREGEKSPEMITGRGPTTE 271

  Fly   863 SISLYAIVRGNESNAGIFYEFTLPALNVTAGRQFQWRLSNWTACSASCGGGVQHREPICQENGKA 927
            .:.:..|.:  |.|.|:.||:.||....|.|  :.|...:|:|||..||.|.|.|...|....:|
Zfish   272 PLVIELITQ--EVNEGVDYEYYLPNGGSTEG--YYWSYGSWSACSKECGSGYQSRLVFCTFEDEA 332

  Fly   928 LGDTLPCWTHAKNKRPARQSRGCGDQPCPA--------------------------HWWPGPWQF 966
            ..|.| |   |...||. .:|.|.:|.||.                          .|..|.|..
Zfish   333 YSDYL-C---ASLPRPL-SNRTCNEQQCPQTRRMAYVYEAQLWRPTETPRVYVQVYSWTAGEWSP 392

  Fly   967 CPVTC--------------------------------RPVG----------------------FV 977
            |||||                                ||:.                      ..
Zfish   393 CPVTCGGGLQARRVECMSHDSTGSRLVEDSQCTAYTPRPLSQQNCNMQKCAQYSIYSWSQCSVTC 457

  Fly   978 APPQRRRSVVCLDEHDVVVADAECGHLQKPAEMEPCESSLPICRT 1022
            ...::.|.|||:......|.|..||:..||...:.||  :|:||:
Zfish   458 GSGKQTRDVVCIGSDGASVEDYACGNQPKPPREQICE--MPMCRS 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 78..194 CDD:279848
ZnMc_ADAMTS_like 314..518 CDD:239801
Reprolysin 315..521 CDD:279729
ADAM_CR <558..602 CDD:301627
TSP1 614..666 CDD:214559 23/51 (45%)
ADAM_spacer1 773..886 CDD:283607 33/116 (28%)
TSP1 901..956 CDD:214559 20/54 (37%)
paplnaXP_005169942.1 TSP1 24..75 CDD:214559 23/51 (45%)
ADAM_spacer1 181..293 CDD:310520 33/117 (28%)
TSP1 303..356 CDD:214559 21/57 (37%)
TSP1 388..442 CDD:214559 9/53 (17%)
TSP1 449..498 CDD:214559 13/50 (26%)
TSP1 504..557 CDD:214559
KU 720..771 CDD:238057
Ig_3 839..906 CDD:316449
IGc2 960..1022 CDD:197706
I-set 1039..1121 CDD:333254
PLAC 1142..1173 CDD:312271
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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