DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-B and col28a1a

DIOPT Version :9

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_001334976.1 Gene:col28a1a / 555428 ZFINID:ZDB-GENE-070705-84 Length:1170 Species:Danio rerio


Alignment Length:91 Identity:27/91 - (29%)
Similarity:34/91 - (37%) Gaps:5/91 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 RGQPATN-VAISTCAGLVGHIRTAGNEYFIEPSKEHEPHPVN--GHPHVVFQRSSVKPKHSLRKR 209
            ||.|... |......|..|.....|.....||..:.||.||.  |.|.:..:..||.||..:...
Zfish   473 RGPPGVGLVGPKGDQGFPGESGPQGERGIGEPGPKGEPGPVGAPGIPGIPGEDGSVGPKGEMGLS 537

  Fly   210 NKRKRGGKSGSG--AEVSNCGTREPR 233
            .:|.:.|..|.|  .|..:.|.|..|
Zfish   538 GERGQEGSPGKGIPGEKGDRGDRGSR 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 78..194 CDD:279848 15/48 (31%)
ZnMc_ADAMTS_like 314..518 CDD:239801
Reprolysin 315..521 CDD:279729
ADAM_CR <558..602 CDD:301627
TSP1 614..666 CDD:214559
ADAM_spacer1 773..886 CDD:283607
TSP1 901..956 CDD:214559
col28a1aNP_001334976.1 vWFA_subfamily_ECM 49..214 CDD:238727
Collagen 266..339 CDD:189968
Collagen 311..384 CDD:189968
Collagen 491..548 CDD:189968 16/56 (29%)
Collagen 529..590 CDD:189968 10/35 (29%)
Collagen 561..633 CDD:189968 1/3 (33%)
Collagen 700..776 CDD:189968
VWA 803..980 CDD:306576
Kunitz_BPTI 1117..1168 CDD:278443
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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