DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-B and Thsd7a

DIOPT Version :9

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_001178899.2 Gene:Thsd7a / 500032 RGDID:1566201 Length:1645 Species:Rattus norvegicus


Alignment Length:797 Identity:155/797 - (19%)
Similarity:215/797 - (26%) Gaps:344/797 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   444 EDNGIMLSHTITHELGH---NFGMFHDTAKIGC-HPRVGPIVHIMTP-TFGADTLQVC------- 496
            ||..:...:|.|...|.   :.||  .|.|:.| ...||.:.....| :...:|::.|       
  Rat   698 EDTSVSSFNTTTTWTGETSCSVGM--QTRKVICVRVNVGQVGPKKCPESLRPETVRPCLLPCRKD 760

  Fly   497 --------WSNC---------------SRKYITHFLDQGLGECLDD---------PPT------- 522
                    |:.|               .::.|......|..||.|.         |||       
  Rat   761 CIMTPYSDWTPCPSSCREGDSGARKQSRQRVIIQLPAYGGRECSDPLYEEKACEAPPTCHSYRWK 825

  Fly   523 -------PLDEYNYTGELPGMR------YNARG-QCR------------LQFNLTTDSEVGACSA 561
                   .|..::...::||.:      ..||. .||            ||:.....:...||..
  Rat   826 THKWRRCQLVPWSIQQDVPGAQEGCGPGRQARAITCRKQDGGQASIQECLQYAGPVPALTQACQI 890

  Fly   562 P-HEFCS-TLWCK---VNGEC---------------------VTHMRPTAPGTLC---------- 590
            | .:.|. |.|.|   .||:|                     .:|:.|......|          
  Rat   891 PCQDDCQFTSWSKFSSCNGDCGAVRTRKRAIVGKSKKKEKCKNSHLYPLIETQYCPCDKYNAQPV 955

  Fly   591 ----------------------GRNKWC-------------QNGKCVRREELAAVNG-GW----- 614
                                  |.||.|             |||:.|   |.:..|. |:     
  Rat   956 GNWSDCILPEGKAEVLLGVKVQGDNKECGQGYRYQAMACYDQNGRLV---ETSRCNSHGYIEEAC 1017

  Fly   615 ----------GDWSEWSECSRSCGGGVSTQQ---RECDNPVPANGGVFCIGERKRYKICRKRPCP 666
                      .:||.||.||:|||.||..:.   ||    .|.|||               ||||
  Rat  1018 IIPCPSDCKLSEWSNWSRCSKSCGSGVKVRSKWLRE----KPYNGG---------------RPCP 1063

  Fly   667 AEEPSFRAQ-----QCARFDNVSYQGATYKW----LPFFDK------------------------ 698
            ..:...:||     .| ..|...|...|..|    :.|.|.                        
  Rat  1064 KLDHVNQAQVYEVVPC-HSDCNQYIWVTEPWSVCKVTFVDMRDNCGEGVQTRKVRCMQNTADGPS 1127

  Fly   699 ----------------NNPCKLFCSDVDDTIIANWGATVLDGTPCT-LGTNNMCIDGICKKV--- 743
                            :..|||.|.  :|.:|:.||.......||. .|:.....|.|.:..   
  Rat  1128 EHVEDYLCDPEDMPLGSRECKLPCP--EDCVISEWGPWTQCSLPCNPSGSRQRSADPIRQPADEG 1190

  Fly   744 -GCDWIVDSEVQDDRCGVCGGSGDQCQPVRETYTDPFAAKDGAYVEIVTIPARARHILIRELANS 807
             .|...|:.|              .|...:..|...:...|.:..::.........|..|     
  Rat  1191 RACPDAVEKE--------------PCNLNKNCYRYDYNVTDWSTCQLSEKAVCGNGIKTR----- 1236

  Fly   808 PHFLAIATGDGG--DRFYLNGDSLISMPGEFEIAGAESLYDRVDEQETITIPQPIQHSISLYAIV 870
              .|.....||.  |..|.            |..|.|..:..   ..:.|:..|:...:|     
  Rat  1237 --MLDCVRSDGKSVDLKYC------------EELGLEKNWQM---NSSCTVECPLNCQLS----- 1279

  Fly   871 RGNESNAGIFYEFTLPALNVTAGRQFQWRLSNWTACSASCG--GGVQHREPICQENGKALGDTLP 933
                                      .|  |.|:.||.:||  |.:..|..:.|   ...||..|
  Rat  1280 --------------------------DW--SPWSECSQTCGLTGKMIRRRTVTQ---PFQGDGRP 1313

  Fly   934 CWTHAKNKRPA--RQSRGCGDQPCPAHWWPGPWQFCPVTCRPVGFVAPPQRRRSVVCLDEHDVVV 996
            |        |:  .||:.|..:|| ..|..|.|..|.|.....|   ...|.|::.|      ||
  Rat  1314 C--------PSLMEQSKPCPVKPC-YRWQYGQWSPCQVQEAQCG---EGTRTRNISC------VV 1360

  Fly   997 ADAECGHLQKPAEMEPC 1013
            :|.......|..:.|.|
  Rat  1361 SDGSADDFSKAVDEEFC 1377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 78..194 CDD:279848
ZnMc_ADAMTS_like 314..518 CDD:239801 21/108 (19%)
Reprolysin 315..521 CDD:279729 22/120 (18%)
ADAM_CR <558..602 CDD:301627 20/114 (18%)
TSP1 614..666 CDD:214559 19/69 (28%)
ADAM_spacer1 773..886 CDD:283607 15/114 (13%)
TSP1 901..956 CDD:214559 18/58 (31%)
Thsd7aNP_001178899.2 TSP1_spondin 184..235 CDD:408798
TSP1_spondin 350..401 CDD:408798
TSP1_spondin 624..683 CDD:408798
TSP1_ADAMTS 688..757 CDD:408800 15/60 (25%)
TSP1_spondin 1025..>1065 CDD:408798 21/58 (36%)
TSP1_ADAMTS 1088..1151 CDD:408800 7/62 (11%)
TSP1_spondin 1155..1206 CDD:408798 12/64 (19%)
TSP1_spondin 1276..1329 CDD:408798 19/96 (20%)
TSP1_spondin 1404..1463 CDD:408798
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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