DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-B and loh

DIOPT Version :9

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_609406.2 Gene:loh / 34435 FlyBaseID:FBgn0032252 Length:880 Species:Drosophila melanogaster


Alignment Length:455 Identity:140/455 - (30%)
Similarity:205/455 - (45%) Gaps:80/455 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   614 WGDWSEWSECSRSCGGGVSTQQREC-------DNPVPANGGVFCIGERKRYKICRKRPCPAEEPS 671
            |..||:||.|||||||||..|.|:|       :|.:.:|.   |:|..|||::|...||..:.|.
  Fly   182 WDKWSDWSSCSRSCGGGVKYQVRKCINRNLLTNNQLTSNA---CVGYFKRYQLCNDVPCDEQSPD 243

  Fly   672 FRAQQCARFDNVSYQGATYKWLPFFDKNNPCKLFCSDVDDTIIANWGATVLDGTPC--------- 727
            |||.||:.:::..:.|..|:|.|:...:..|:|.|........|....:|:|||||         
  Fly   244 FRASQCSAYNDKEFHGHRYRWEPYVKDDAECELNCMPFGMKSFATLNESVIDGTPCGHPAEYFRS 308

  Fly   728 TLGTNNMCIDGICKKVGCDWIVDSEVQDDRCGVCGGSGDQCQPVRETYT-DPFAAKDGAYVEIVT 791
            ......:|:||.||.|.....:|..........|||.  .|:||...:| :|.  .:.||:.:.|
  Fly   309 QFWERAVCVDGACKAVQASGEIDGLYAHSGSVSCGGL--LCRPVTGIFTRNPL--PEHAYIHVTT 369

  Fly   792 IPARARHILIRELANSPHFLAIATGDGGDRFYLNGDSLISMPGEFEIAGAESLYDRVDEQET--- 853
            :|..|.:|.|.||.||.:.|.:.|.:  :....||::.:|..|.:|..||...|.|:|..|.   
  Fly   370 LPVGASNISITELKNSINLLVLRTSN--ELAIFNGENTVSESGSYEAVGAVFDYHRIDGAEDSNG 432

  Fly   854 ----ITIPQPIQHSISLYAIVRGNESNAGIFYEFTLPALNVT----------------------- 891
                ||...||:.|:.|....: :.:|.|:.||:.||.::.:                       
  Fly   433 VTEWITSIGPIRDSLQLMVFTK-SANNTGVKYEYMLPIVSESEENEMSLESSDGLLRSGMEDTSS 496

  Fly   892 -----AGRQ--FQWRLSNWTACSASCGGGVQHREPI--C-QENGKALGDTLPCWTHAKNKRPARQ 946
                 |||:  |.|::..:::|:.|||||.|  .||  | ::|.........| ||:........
  Fly   497 SSSSRAGRKRIFNWKVIGFSSCTKSCGGGTQ--TPIIRCIRKNPLRYYSQRRC-THSVKPVLNEN 558

  Fly   947 SRGCGDQPCPAHWWPGPWQFCPVTCRPVGFVAPPQRRRSVVCLDEHDVVVADAECGHLQKPAEME 1011
            ...|..|||||:|....|..|  .|...|.:    |||.|.|:.|    :|.....|:.|.|.||
  Fly   559 LLHCNTQPCPAYWRFDDWGEC--RCSSSGGL----RRREVSCVQE----LASGLVIHVDKAACME 613

  Fly  1012  1011
              Fly   614  613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 78..194 CDD:279848
ZnMc_ADAMTS_like 314..518 CDD:239801
Reprolysin 315..521 CDD:279729
ADAM_CR <558..602 CDD:301627
TSP1 614..666 CDD:214559 26/58 (45%)
ADAM_spacer1 773..886 CDD:283607 36/120 (30%)
TSP1 901..956 CDD:214559 17/57 (30%)
lohNP_609406.2 TSP1 182..238 CDD:214559 26/58 (45%)
ADAM_spacer1 348..468 CDD:283607 38/124 (31%)
TSP1 667..716 CDD:214559
TSP1 779..835 CDD:214559
PLAC 847..877 CDD:285849
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438273
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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