DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-B and Adamtsl2

DIOPT Version :9

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:XP_038962070.1 Gene:Adamtsl2 / 311827 RGDID:1305459 Length:957 Species:Rattus norvegicus


Alignment Length:841 Identity:166/841 - (19%)
Similarity:229/841 - (27%) Gaps:459/841 - (54%)


- Green bases have known domain annotations that are detailed below.


  Fly   609 AVNGG-------WGDWSEWSECSRSCGGGVSTQQREC----DNPVPANGGVFCIGERKRYKICRK 662
            ::.||       ||:|::|:.|||||||||::|:|.|    ...||..|...|:|..|||::||.
  Rat    38 SLEGGADATAYWWGEWTKWTACSRSCGGGVTSQERHCLQQRRKSVPGAGNRTCVGTSKRYQLCRV 102

  Fly   663 RPCPAEEPSFRAQQCARFDNVSYQGATYKWLPFFD------KNNPCKLFCSDVDDTIIANWGATV 721
            :.||.:..|||.:||..|::..|.|..|:|.|.:.      .:.||.|.|:.||       |...
  Rat   103 QECPPDGRSFREEQCVSFNSRVYDGRAYQWKPLYPDDYMHISSKPCDLHCTTVD-------GQRQ 160

  Fly   722 L-----DGTPCTL-GTNNMCIDGICKKVGCDWIVDSEVQDDRCGVCGGSGDQCQPVRETYTDPFA 780
            |     |||.|.| ....:|:.|.|:.:|||.::.|....|:||||.|.|..|..|...|     
  Rat   161 LMVPARDGTSCKLTDLRGVCVSGKCEPIGCDGVLFSTHTLDKCGVCQGDGSSCTHVTGNY----- 220

  Fly   781 AKDG----AYVEIVTIPARARHILIRELANSPHFLAIATGDGGDRFYLNGDSLISMPGEFEIAGA 841
             :.|    .|..:..|||.||.|.|.|...|...||:|  |....::.||:..:..|..|.|||.
  Rat   221 -RKGDNHLGYSLVTHIPAGARDIQIVERKKSADVLALA--DEAGFYFFNGNYKVDSPKNFNIAGT 282

  Fly   842 ESLYDR-VDEQET----------------------------IT-----IPQP------------- 859
            ...|.| :|..||                            ||     :..|             
  Rat   283 VVKYRRPMDVYETGIEYIVAQGPTNQGLNVMVWNQNGKSPSITFEYTLLQSPHMHHLPPVYYSFS 347

  Fly   860 -----------------------IQHSISLY------------------------AIVRGNESNA 877
                                   :||:.|||                        ...||.|:|.
  Rat   348 EAASESTESTERQELDSARLLGFLQHNGSLYGQPSSERLGLNSQLFPPTAPEVELGPSRGQETNE 412

  Fly   878 ----------------------------------------------------------------- 877
                                                                             
  Rat   413 VCKQASGGVCEGPPRGKGFQDHNATGRALLGDKDDREISAHFTSHELLSANTISDQLLGTGSDSE 477

  Fly   878 -----------------------------------------GIFYEF------------------ 883
                                                     |.:.|.                  
  Rat   478 EFSLNETMNSIFAQGAPRSSPAESLYVDYEENEGPAAYLINGSYLELNSDRINTSSEAPFPNTSA 542

  Fly   884 TLPAL--NVT------------------------------------------------------- 891
            :||:|  |.|                                                       
  Rat   543 SLPSLAGNRTHKARTRPKARKQGVSPADMYRWKLSSQEPCSATCTTGVMSAYAMCVRYDGVEVDD 607

  Fly   892 ----------------AGRQFQ--WRLSNWTACSASCGGGVQHR--------------------- 917
                            |||:.|  |..|:|:.||.:||.|.|.|                     
  Rat   608 SYCDALTRPEPVHEFCAGRECQPRWETSSWSECSRTCGEGHQFRIVRCWKMLSPGFDSSVYSDLC 672

  Fly   918 --------------------------------------------------EPICQENGKALGDT- 931
                                                              |.:|..|.:.:|:. 
  Rat   673 EATEAVRPEERKTCRNPACGPQWEMSEWSECTAKCGERSVVTRDIRCSEDERLCDPNTRPVGEKN 737

  Fly   932 ---LPC---WTHAKNKRPARQSRG----------------------------------CGDQPCP 956
               .||   || ..:..|...|.|                                  |||:.||
  Rat   738 CTGPPCDRQWT-VSDWGPCSGSCGQGRTIRHVYCKTSDGRVVPESQCQTETKPLAIHPCGDKNCP 801

  Fly   957 AHWWPGPWQFCPVTC-RPVGFVAPPQRRRSVVCLD---EHDVVVADAECGHLQKPAEMEPC 1013
            |||....|:.|..|| |.|       ::|.|:|::   ....:.:.:|||..:||.|...|
  Rat   802 AHWLAQDWERCNTTCGRGV-------KKRLVLCMELANGKPQMRSGSECGLARKPPEESTC 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 78..194 CDD:279848
ZnMc_ADAMTS_like 314..518 CDD:239801
Reprolysin 315..521 CDD:279729
ADAM_CR <558..602 CDD:301627
TSP1 614..666 CDD:214559 26/55 (47%)
ADAM_spacer1 773..886 CDD:283607 42/334 (13%)
TSP1 901..956 CDD:214559 23/166 (14%)
Adamtsl2XP_038962070.1 TSP1 50..106 CDD:214559 26/55 (47%)
ADAM_spacer1 216..330 CDD:368694 31/121 (26%)
TSP1_ADAMTS 632..691 CDD:408800 10/58 (17%)
TSP1_ADAMTS 695..743 CDD:408800 4/47 (9%)
TSP1_ADAMTS 747..800 CDD:408800 8/53 (15%)
TSP1_ADAMTS 804..860 CDD:408800 17/59 (29%)
TSP1_ADAMTS 863..913 CDD:408800
PLAC 922..953 CDD:400844
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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