DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-B and Adamtsl4

DIOPT Version :9

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:XP_038958286.1 Gene:Adamtsl4 / 310670 RGDID:1561012 Length:1035 Species:Rattus norvegicus


Alignment Length:538 Identity:147/538 - (27%)
Similarity:207/538 - (38%) Gaps:138/538 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   557 GACSAPHEFCSTLWCKVNGECVTHMRPTAPGTLCGRNKWCQNGKCVRREELAAVNGGW------- 614
            ||...||.|                .|.....| .|..|...|...|..:      ||       
  Rat   273 GAERQPHPF----------------SPVTRSQL-SRRHWRPPGSPHRSPD------GWLPLTRDS 314

  Fly   615 -GDWSEWSECSRSCGGGVSTQQRECDNPVPANGGVFCIGERKRYKICRKRPCPAEEPSFRAQQCA 678
             ..||.::..|                |.|.     |.||.::.:.|.:.|||.|:|..||.|||
  Rat   315 SPHWSLFAPSS----------------PTPE-----CSGESEQMRACSQEPCPPEQPDPRALQCA 358

  Fly   679 RFDNVSYQGATYKWLPFFD--KNNPCKLFCSDVDDTIIANWGATVLDGTPCTLGTNNMCIDGICK 741
            .||:..:.|..|:|.||.:  .:..|:|.|..............|.|||.|..|:.::|:.|.|.
  Rat   359 AFDSQEFMGQLYQWEPFTEVQGSQRCELNCRPRGFRFYVRHTEKVQDGTLCQPGSLDICVAGHCL 423

  Fly   742 KVGCDWIVDSEVQDDRCGVCGGSGDQCQPVRETYTDPFAAKDG--AYVEIVTIPARARHILIREL 804
            ..|||.|:.|..:.|.||||||.|..|:.|....||    :.|  .|.:|:.|||.|.|:.|.:.
  Rat   424 SPGCDGILGSGRRPDGCGVCGGDGSTCRLVSGNLTD----RGGPLGYQKILWIPAGASHLRISQF 484

  Fly   805 ANSPHFLAIATGDGGDRFYLNGDSLISMPGEFEIAGAESLYDRVDEQ----ETITIPQPIQHSIS 865
            ..|.::||: .|.|| |..:||:..:..||.:...|....|:|...:    ||::...|....:.
  Rat   485 RPSSNYLAL-RGPGG-RSIINGNWAVDPPGSYAAVGTVFQYNRPPREEGKGETLSAEGPTTQPVD 547

  Fly   866 LYAIVRGNESNAGIFYEFTL-----------PALNV----------------------TAGRQFQ 897
            :|.|.:  |.|.|:||::..           |||.:                      |..||.:
  Rat   548 VYMIFQ--EDNPGVFYQYVTSAAPESPSTMPPALQLQPEMLRGEPLLPSAPRPVRAPGTLQRQAR 610

  Fly   898 --------------------WRLSNWTACSASCGGGVQHREPIC--QENGKALGDTLPCWTHAKN 940
                                |:....:.||||||.||.....:|  :|:|:.| |...|   |..
  Rat   611 IPQVPPPTHVRTAMGSSAGYWKQVGHSECSASCGKGVWRPIFLCVSRESGEEL-DEQSC---AVG 671

  Fly   941 KRPARQSRGCGDQPCPAHWWPGPWQFCPVTCRPVGFVAPPQRRRSVVCLDEH---DVVVADAECG 1002
            .||......|...|||.:|..|.|..|..:|      .|..:.|.::|..|.   ...|....||
  Rat   672 ARPPASPESCHRPPCPPYWEAGEWTSCSRSC------GPGTQHRQLLCRQEFGGGGSSVPPERCG 730

  Fly  1003 HLQKPAEMEPCESSLPIC 1020
            ||.:|...:.|:  |.:|
  Rat   731 HLPRPNITQSCQ--LRLC 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 78..194 CDD:279848
ZnMc_ADAMTS_like 314..518 CDD:239801
Reprolysin 315..521 CDD:279729
ADAM_CR <558..602 CDD:301627 9/43 (21%)
TSP1 614..666 CDD:214559 11/59 (19%)
ADAM_spacer1 773..886 CDD:283607 35/129 (27%)
TSP1 901..956 CDD:214559 19/56 (34%)
Adamtsl4XP_038958286.1 PHA03247 <24..358 CDD:223021 30/128 (23%)
ADAM_spacer1 451..564 CDD:368694 36/120 (30%)
TSP1_ADAMTS 637..686 CDD:408800 18/52 (35%)
TSP1_ADAMTS 690..746 CDD:408800 17/63 (27%)
TSP1_ADAMTS 754..804 CDD:408800
TSP1_ADAMTS 808..869 CDD:408800
TSP1_ADAMTS 875..931 CDD:408800
TSP1_ADAMTS 935..986 CDD:408800
PLAC 994..1023 CDD:400844
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 69 1.000 Domainoid score I9371
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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