DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-B and Thsd7b

DIOPT Version :10

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_001178598.1 Gene:Thsd7b / 289007 RGDID:1306938 Length:1607 Species:Rattus norvegicus


Alignment Length:790 Identity:161/790 - (20%)
Similarity:247/790 - (31%) Gaps:307/790 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   382 QKNLDRFCSWQHKLNKGSEKDPHHHDVAILITRKNICANNCMTLGLANVGGMCKPKQSCSVNEDN 446
            :::..|.|.|...|.:....|.|                .|:.:..|.  |..:|:....|...:
  Rat    90 ERSCFRVCDWHSDLFQWEVSDWH----------------RCLLVPGAQ--GEPRPRAVECVTAQH 136

  Fly   447 GIM---------LSHT-ITHELGHNFGMFHDTAK---IGCHPRVGPIVHIMTPTFGADTLQVCWS 498
            |:.         |:.| :..|:..:|.....|.:   |.| || ..:|...:|          ||
  Rat   137 GLQHRTVRCLQKLNRTMVASEICEHFVPQPPTEQACLIPC-PR-DCVVSEFSP----------WS 189

  Fly   499 NCSRKYITHFLDQGLGECLDD-------PP---------------------TPL--DEYNYTGEL 533
            .|         .:|.|:.|..       ||                     .||  :||:::   
  Rat   190 TC---------PEGCGKKLQHRTRVAIAPPLYGGLQCPNLTESRACEAPISCPLGKEEYSFS--- 242

  Fly   534 PGMRYNARGQCRLQFNLTTDSEVGACSAPHEFCSTLWCKVNGECVTHMRPTA-----PGTL-CG- 591
              ::.....:|||..  ..::|:|..:. .:|.|....:|.   :||....|     ||.: .| 
  Rat   243 --LKVGPWSKCRLPH--LKEAELGGRNV-QDFSSDSNEQVT---LTHQSYKAQHHSQPGAIEIGF 299

  Fly   592 --RNKWC--QNGK------------------CVRREELAAVNGGWGDWSEWSECSRSC-----GG 629
              |..||  .:|:                  ||..::...     .:||.||.||::|     ..
  Rat   300 QTRQVWCTRSDGRNALLSLCMRDSFPLTVQPCVMPKDCET-----SEWSPWSPCSKTCRSGTLSP 359

  Fly   630 GVSTQQRECDNPVPANGGVFCIGERKRYKICRKRPCPAEEPSFRAQQCARFDNVSYQGATYKWL- 693
            ||.::.|...: :...||..|      .::..|..|.||....  |.|.|     |...|.:|. 
  Rat   360 GVRSRSRNVKH-IAIGGGQEC------PELLEKETCIAEGEFL--QPCPR-----YSWRTSEWKE 410

  Fly   694 -----------PFFDKNNP-C-------KLFCSDVDDTIIANWGATV----------LDGTPCTL 729
                       |.:.|..| |       :::|:.       ::.||:          ::.|.| |
  Rat   411 CQVSLLLEQQDPLWHKTGPICGGGIQTREVYCAQ-------SFPATITSRTKEVSRPVESTLC-L 467

  Fly   730 G----TNNMCIDGICKKVGC--DWIVDSEVQDDRCGVCGGSGDQCQPVRETYTDPFAAKDGAYVE 788
            |    .:.:|      .|.|  |.||.|.   ...|.|         |.|...||...|.     
  Rat   468 GPAPSASQLC------NVPCSTDCIVSSW---SAWGPC---------VYENCHDPQGKKG----- 509

  Fly   789 IVTIPARARHILIRE---LANSPHFLAIATGDGGDRFYLNGDSLISMPGEFEIAGAESLYDRVDE 850
               ...|.||:|:..   :.:.||...                  |:|.|      :.:..|...
  Rat   510 ---FRMRQRHVLMESTGPVGHCPHLAE------------------SVPCE------DPMCYRWLA 547

  Fly   851 QETITIPQ----PIQHSISLYAIV---RGNESNAGIFYEFTLP------ALNVTAGRQ---FQWR 899
            .|.|.||.    .:.|.| |.|:.   ||.|.:.|:   ..:|      |..:.....   .:|.
  Rat   548 SEGICIPDHGKCGLGHRI-LKAVCQNERGEEVSGGL---CPVPPPPERMACEIPCRMDCVVSEWT 608

  Fly   900 LSNWTACSASCGG----GVQHRE----PICQENGKALGDTLPCWTHAKNKRPARQSRGCGDQPC- 955
            :  |::||.||..    |.|.|.    .:..|.||      ||    ...:..::.|.|.|..| 
  Rat   609 V--WSSCSQSCSNKNSDGKQTRSRSIVALAGEGGK------PC----PGSQELQEYRLCNDHSCA 661

  Fly   956 PAHWWPGPWQFC-----------------PVTCRPVGFVAPPQRRRSVVCLDEHDVVVADAECGH 1003
            ..:|....|..|                 ..|| .||.     :.|.|.|:..|...|....|..
  Rat   662 QLYWETSAWGSCSENTLVTALNMSIGWNGEATC-GVGI-----QTRKVFCIKSHVGQVMTKRCPE 720

  Fly  1004 LQKPAEMEPC 1013
            ..:|..:.||
  Rat   721 STRPETVRPC 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 47..195 CDD:460254
ZnMc_ADAMTS_like 314..518 CDD:239801 28/148 (19%)
ADAMTS_CR_2 534..602 CDD:465496 18/96 (19%)
TSP1 614..666 CDD:214559 14/56 (25%)
ADAMTS_CR_3 672..768 CDD:437068 26/131 (20%)
ADAMTS_spacer1 770..886 CDD:461796 27/125 (22%)
TSP1 901..956 CDD:214559 17/63 (27%)
TSP1_ADAMTS 959..1020 CDD:465950 16/72 (22%)
Thsd7bNP_001178598.1 TSP1_spondin 602..660 CDD:465948 17/69 (25%)
TSP1_ADAMTS 665..733 CDD:465950 16/72 (22%)
TSP1_spondin 738..789 CDD:480609
TSP1_ADAMTS 1063..1123 CDD:465950
TSP1_spondin 1129..1175 CDD:480609
TSP1_spondin 1249..1302 CDD:465948
TSP1_spondin 1372..1431 CDD:480609
TSP1_ADAMTS 44..95 CDD:465950 0/4 (0%)
TSP1_spondin 180..229 CDD:465948 10/67 (15%)
TSP1_spondin 337..398 CDD:465948 18/74 (24%)
TSP1_spondin 485..542 CDD:480609 19/100 (19%)
Blue background indicates that the domain is not in the aligned region.

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