DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-B and Thsd7b

DIOPT Version :9

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:XP_011246266.1 Gene:Thsd7b / 210417 MGIID:2443925 Length:1609 Species:Mus musculus


Alignment Length:593 Identity:121/593 - (20%)
Similarity:178/593 - (30%) Gaps:242/593 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   496 CWSNCS-----RKYIT-------HFLDQGLGECLDDPPTPLDEY------NYTG-ELP-GMRYNA 540
            |..||.     |:.:|       ...|..|...::..|.|.|.:      |::. .|| |.|...
Mouse   883 CSKNCEATQIRRRQLTGKSRKKEKCQDASLYPLVEMEPCPCDTFMSHPYGNWSACILPEGKRDAQ 947

  Fly   541 RGQCRLQFNLTTDSEVG--------ACSAPHEFCSTLWCKVNGECVTHMRPTAPGTLCGRNKWCQ 597
            :|...:|.:   |.|.|        |||           .:||      ||..| :.|..:.:.|
Mouse   948 QGGLWVQGD---DKECGEGVRFRAIACS-----------NING------RPVDP-SFCNSSGYIQ 991

  Fly   598 NGKCVRREELAAVNGGWGDWSEWSECSRSCGGGVSTQQRECDNPVPANGGVFCIGERKRYKICRK 662
            .. ||..   ...:....|||.|..||.|||.||..:.:..... |.:||               
Mouse   992 EA-CVIP---CPFDCKLSDWSSWGSCSSSCGIGVRIRSKWLKEK-PYSGG--------------- 1036

  Fly   663 RPCPAEEPSFRAQQCARFDNVSYQGATYKWLPFFDKNNPCKLFCSDVDDTIIANWGATVLDGTPC 727
            ||||..:...:||                    ..:..||...| |....::.:|       :||
Mouse  1037 RPCPKLDLKNQAQ--------------------VHEAVPCYSEC-DQYSWVVEHW-------SPC 1073

  Fly   728 TLGTNNMCIDGICKKVGCDWIVDSEVQDDRCGVCGGSGDQCQPVRETYTDPFAAKDGAYVEIVTI 792
            .                    :::|::..||    |.|.|.:.:|...|   |.::|..|.    
Mouse  1074 K--------------------INNELRSPRC----GRGTQSRRIRCVST---ADREGGAVN---- 1107

  Fly   793 PARARHILIRELANSPHFLAIATGDGGDRFYLNGDSLISMPGEFEIAGAESLYDRVDEQETITIP 857
                     |.|.|..                                     |...|.:..::.
Mouse  1108 ---------RSLCNQD-------------------------------------DAPQETQACSLL 1126

  Fly   858 QPIQ-------------HSISLYAIVRGNESNAGIFYEFTLPALNV-TAGR-------------- 894
            .|.:             .|...:|:.|...       ....|:||. |.|.              
Mouse  1127 CPSECVMSEWGTWSRCPQSCDPHAMQRRTR-------HLLRPSLNSRTCGEDSQVRPCLLNENCF 1184

  Fly   895 QFQWRLSNWTAC----SASCGGGVQHREPIC-QENGKALGDTLPCWTHAKNK---RPARQSRGCG 951
            |||:.|:.|:.|    :.|||.||:.|...| :.:||::.     ..|.:.:   :|.|.|..|.
Mouse  1185 QFQYNLTEWSTCQLSENVSCGQGVRTRLLSCVRSDGKSVS-----MDHCEQRNLEKPQRMSIPCL 1244

  Fly   952 DQ---PCPAHWWPGPWQFCPVTCRPVG------FVAPPQRRRSVVCLDEHDVVVADAECGHLQKP 1007
            .:   .|....|. .|..|..||...|      |:..|.:.....|..|..          .|||
Mouse  1245 VECVVNCQLSGWT-TWTECSQTCGQGGRMSRTRFIIMPTQGEGRQCPTELT----------QQKP 1298

  Fly  1008 AEMEPCES 1015
            ..:.||.|
Mouse  1299 CPVTPCYS 1306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 78..194 CDD:279848
ZnMc_ADAMTS_like 314..518 CDD:239801 7/33 (21%)
Reprolysin 315..521 CDD:279729 7/36 (19%)
ADAM_CR <558..602 CDD:301627 10/43 (23%)
TSP1 614..666 CDD:214559 16/51 (31%)
ADAM_spacer1 773..886 CDD:283607 13/125 (10%)
TSP1 901..956 CDD:214559 16/65 (25%)
Thsd7bXP_011246266.1 TSP1_ADAMTS 44..95 CDD:408800
TSP1_ADAMTS <137..176 CDD:408800
TSP1_spondin 180..229 CDD:408798
TSP1_spondin 337..398 CDD:408798
TSP1_spondin 602..660 CDD:408798
TSP1_ADAMTS 665..734 CDD:408800
TSP1_spondin 738..789 CDD:408798
TSP1_ADAMTS 1065..1125 CDD:408800 19/143 (13%)
TSP1_spondin 1131..1177 CDD:408798 8/52 (15%)
TSP1_spondin 1251..1304 CDD:408798 14/63 (22%)
TSP1_spondin 1374..1433 CDD:408798
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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