DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-B and Thsd4

DIOPT Version :9

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_001035516.2 Gene:Thsd4 / 207596 MGIID:2672033 Length:1018 Species:Mus musculus


Alignment Length:698 Identity:142/698 - (20%)
Similarity:195/698 - (27%) Gaps:305/698 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   612 GGWGDWSEWSECSRSCGGGVSTQQREC-------------------------------------- 638
            |.||.|..||.|||||.|||..|.|.|                                      
Mouse    55 GVWGSWGPWSACSRSCSGGVMEQTRPCLPSSYRARGGSRPNGRALSITGHVVSAVRTSVPLHRSQ 119

  Fly   639 ----------------------------------------------------------------- 638
                                                                             
Mouse   120 EDQRALAGSNASRQGPAVVRGSRHPQARGREPSERRSRTRGPIGPGKYGYGKAPYILPLQTDTTH 184

  Fly   639 ----------------------------------------------------------------- 638
                                                                             
Mouse   185 TPQRLRRQRPSSRHSRSQEASASKQGYRPPTHQFSHSQPLYQSDSGPRSGLPPSEASIYQLPLTH 249

  Fly   639 DNPVPANGGVF------------------------------CIGERKRYKICRKRPCPAEEPSFR 673
            |...||...:|                              |||..::||:|....||....|.|
Mouse   250 DQSYPAASSLFHRPELSSHHGARPHGAAQAFPQHLRSTAISCIGAYRQYKLCNTNACPESGRSIR 314

  Fly   674 AQQCARFDNVSYQGATYKWLPFFD--KNNPCKLFCSDVDDTIIANWGATVLDGTPCTLGTNNMCI 736
            ..|||.::|..:.|..|:|.||.:  .|..|:|.|..............|:|||||......:|:
Mouse   315 EVQCASYNNKPFMGRFYEWEPFAEVKGNRKCELNCQATGYRFYVRQAEKVIDGTPCDQNGTAICV 379

  Fly   737 DGICKKVGCDWIVDSEVQDDRCGVCGGSGDQCQPVRETYTDPFAAKDGAYVEIVTIPARARHILI 801
            .|.||.:|||..:.|:...|:||||||....||.|...:  ..|.....|..:|.||..|..|.|
Mouse   380 SGQCKSIGCDDFLGSDKVLDKCGVCGGDNTGCQVVSGVF--KHALTSLGYHRVVEIPQGATKINI 442

  Fly   802 RELANSPHFLAIATGDGGDRFYLNGDSLISMPGEFEIAGAESLYDRVDE-----QETITIPQPIQ 861
            .|:..|.::||:.:..|  |..:||:..|..||::|..|....|.|.:|     .|:.....|..
Mouse   443 TEMHKSNNYLALRSRSG--RSIINGNWAIDRPGKYEGGGTMFTYKRPNEVSSTAGESFLAEGPTN 505

  Fly   862 HSISLYAIVRGNESNAGIFYEFTLPALNVTA---------GRQFQWRLS---------------- 901
            ..:.:|.|  ..:.|.|:.||:.:...|..:         |..|..:|.                
Mouse   506 EILDVYMI--HQQPNPGVHYEYVIMRNNAISPQVPPHRRPGEPFNGQLEEEDRGQEDREEREKNQ 568

  Fly   902 ---------------------------------------------------NW-----TACSASC 910
                                                               ||     |.||.:|
Mouse   569 EKEDSQVEAPEVFTSESTQTFPVRHPERFPSHRPDNLVPPAPQPPRRSRDHNWKQLGTTECSTTC 633

  Fly   911 GGGVQHREPICQENGKALGDTLPCWTHAKNKRPARQSRGCGDQPCPAHWWPGPWQFCPVTCRPVG 975
            |.|.|:  ||.:...:...:.:|......:.:|..:...|...||||.|..|.|..|..|| .:|
Mouse   634 GKGSQY--PIFRCVHRNTHEEVPESYCDSSMKPTPEEEPCNLFPCPAFWDIGEWSECSKTC-GLG 695

  Fly   976 FVAPPQRRRSVVCLD---EHDVVVADAECGHLQKPAEMEPCESSLPIC 1020
                 .:.|.|:|..   ...:.|....|.||:||.....|:  |.||
Mouse   696 -----MQHRQVLCRQVYANRSLTVQPYRCQHLEKPETTSTCQ--LKIC 736

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 78..194 CDD:279848
ZnMc_ADAMTS_like 314..518 CDD:239801
Reprolysin 315..521 CDD:279729
ADAM_CR <558..602 CDD:301627
TSP1 614..666 CDD:214559 26/249 (10%)
ADAM_spacer1 773..886 CDD:283607 32/117 (27%)
TSP1 901..956 CDD:214559 15/126 (12%)