DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-B and mig-6

DIOPT Version :9

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_505017.1 Gene:mig-6 / 179162 WormBaseID:WBGene00003242 Length:2167 Species:Caenorhabditis elegans


Alignment Length:406 Identity:131/406 - (32%)
Similarity:195/406 - (48%) Gaps:29/406 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   612 GGWGDWSEWSECSRSCGGGVSTQQRECDNPVPANGGVFCIGERKRYKICRKRPCPAEEPSFRAQQ 676
            |.||.|...:||||||||||..::|:|...        |.|...||..|....|.: ...|||:|
 Worm    77 GNWGPWVPENECSRSCGGGVQLEKRQCSGD--------CTGASVRYISCNLNACES-GTDFRAEQ 132

  Fly   677 CARFDNVSYQGATYKWLPFFDKNNPCKLFCSDVDDTIIANWGATVLDGTPCTLGTNNMCIDGICK 741
            |::|::.:..|..:||.|:..||. |:|.|..........|...|:|||.|...:|::|:||.|.
 Worm   133 CSKFNDEALDGNYHKWTPYKGKNK-CELVCKPESGNFYYKWADKVVDGTKCDSKSNDICVDGECL 196

  Fly   742 KVGCDWIVDSEVQDDRCGVCGGSGDQCQPVRETYTDPFAAKDGAYVEIVTIPARARHILIRELAN 806
            .||||..:.|.::.|:||.|.|.|..|:.:...:.:...:.  .|.:|:.:|..|.:|.|:|...
 Worm   197 PVGCDGKLGSSLKFDKCGKCDGDGSTCKTIEGRFDERNLSP--GYHDIIKLPEGATNIKIQEARK 259

  Fly   807 SPHFLAIATGDGGDRFYLNGDSLISMPGEFEIAGAESLYDRVDEQETITIPQPIQHSISLYAIVR 871
            |.:.||:.  :|.|.|||||:.||.:..|.|:.|...:||.. |.||::...|:...:::..:.|
 Worm   260 STNNLALK--NGSDHFYLNGNGLIQVEKEVEVGGTIFVYDDA-EPETLSAQGPLSEELTVALLFR 321

  Fly   872 GNESNAGIFYEFTLPALNVTAGRQFQWRLSNWTACSASCGGGVQHREPICQENGKALGDTLPCWT 936
            ....:..|.|||::|   :.....:.::..|||.||.|||.|||.|...|.: ||..|.......
 Worm   322 KGSRDTAIKYEFSIP---LEEEVDYMYKFDNWTPCSVSCGKGVQTRNLYCID-GKNKGRVEDDLC 382

  Fly   937 HAKNKRPARQSRGCGDQPCPAHWWPGPWQFCPVTCRPVGFVAPPQRRRSVVC----LDEHDVVVA 997
            ...|.......:.|....|.|.|:.|.|:.|..||...|     |:.|.|.|    .:...|.|.
 Worm   383 EENNATKPEFEKSCETVDCEAEWFTGDWESCSSTCGDQG-----QQYRVVYCHQVFANGRRVTVE 442

  Fly   998 DAECGHLQKPAEMEPC 1013
            |..| .:::|...:.|
 Worm   443 DGNC-TVERPPVKQTC 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 78..194 CDD:279848
ZnMc_ADAMTS_like 314..518 CDD:239801
Reprolysin 315..521 CDD:279729
ADAM_CR <558..602 CDD:301627
TSP1 614..666 CDD:214559 20/51 (39%)
ADAM_spacer1 773..886 CDD:283607 33/112 (29%)
TSP1 901..956 CDD:214559 18/54 (33%)
mig-6NP_505017.1 TSP1 79..123 CDD:214559 20/51 (39%)
ADAM_spacer1 224..336 CDD:283607 33/116 (28%)
TSP1 350..402 CDD:214559 17/52 (33%)
TSP1 468..525 CDD:214559
TSP1 651..702 CDD:214559
Kunitz_BPTI 1088..1142 CDD:278443
KU 1149..1203 CDD:238057
KU 1269..1321 CDD:238057
Kunitz_BPTI 1374..1426 CDD:278443
Kunitz_BPTI 1446..1498 CDD:278443
KU 1502..1555 CDD:238057
Kunitz_BPTI 1621..1672 CDD:278443
Kunitz_BPTI 1731..1782 CDD:278443
Kunitz_BPTI 1789..1841 CDD:278443
Kunitz_BPTI 1852..1904 CDD:278443
KU 1912..1964 CDD:238057
IG_like 1998..2068 CDD:214653
IGc2 1999..2054 CDD:197706
PLAC 2128..2160 CDD:285849
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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