DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-B and madd-4

DIOPT Version :9

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_492405.3 Gene:madd-4 / 172706 WormBaseID:WBGene00009958 Length:1045 Species:Caenorhabditis elegans


Alignment Length:602 Identity:137/602 - (22%)
Similarity:184/602 - (30%) Gaps:261/602 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   614 WGDWSEWSECSRSCGGGVSTQQRECDNPVPANGGVFCIGERKRYKICRKRPCPAEEPSFRAQQCA 678
            |..||.||.|:::||||||.|.|.|....       |.||..|:|:|.::.|.::....|...|.
 Worm    26 WAAWSPWSSCTKTCGGGVSRQLRRCLTSK-------CSGESVRFKVCAQKTCESKSRLARDTICG 83

  Fly   679 RFDNVSYQGATYKWLPFFDKNNPCKLFCSDVDDTIIANWGATVLDGTPCTLGTNN-MCIDGICKK 742
            ..:.||              ...|::.|.  .....||:...|.|||||...|:. :|..|.|:.
 Worm    84 GEEIVS--------------RGQCEVVCR--SRLTGANFLWRVDDGTPCQAATSRAVCSKGSCQI 132

  Fly   743 VGCDWIVDSEVQDDRCGVCGGSGDQCQ------PVRETYT------DPFAAKDGA---------- 785
            ||||.::.|..:.|.||||||.||.|.      .|.|.||      |......||          
 Worm   133 VGCDGLISSSFRFDACGVCGGRGDTCDNGKFIWKVSEEYTACASNCDDIVDWSGAGRSIASTSQP 197

  Fly   786 ----------------------------------------------------------------- 785
                                                                             
 Worm   198 IVVCVNAITGRVVPEKLCADKLRPKVEARPCPMLICPSRCRWMAADWTECVPHCGEGTRKREVYC 262

  Fly   786 --------------YVEIVTIPA-----------------------------RARHILI------ 801
                          :.|..|.||                             |.||:..      
 Worm   263 VQTAHNVTVHVPDTFCENGTRPAAEENCVSTSCGRWEAGKWSKCTASCGQGVRRRHVACVGGSDC 327

  Fly   802 ------RE----LANSPHFLAIATGDGGDRFYLNGDSLISMPGEFE------IAGAES------- 843
                  |:    .|..|..:|..:.|..||.||:|::..||....:      :||..|       
 Worm   328 DEGGRPRQETTCYAGIPCSIATNSLDWNDRAYLDGNTFGSMDNHNDWQAPRLVAGEWSTCSSTCG 392

  Fly   844 --LYDRVDE--------QETITIPQ--------------------PIQHSISLYAIVRGNESNAG 878
              :..|..|        ...|.:|.                    |:|....|      :|..| 
 Worm   393 TGVMSRTVECVAVNPISSAPIKLPMSECQDQEQPKLFESCEVRSCPLQEDSKL------SEDEA- 450

  Fly   879 IFYEFTLPALNVTAGRQFQWRLSNWTACSASCGGGVQHREPICQE--NGKALGDTLPCWTHA-KN 940
                            .:|||..:||.|||||.||.|.....|.:  .||::.     |:.. ..
 Worm   451 ----------------PYQWRYGDWTQCSASCLGGKQKAALKCIQVSTGKSVQ-----WSQCDAR 494

  Fly   941 KRPARQSRGCGDQPCPAHWWPGPWQFCPVTCRPVGFVAPPQRRRSVVC---------LDEHDVVV 996
            :||..:||.|...|||..|....:..|.::|      .....||||.|         .|.| :|:
 Worm   495 RRPPEKSRPCNQHPCPPFWLTSKYSDCSMSC------GSGTARRSVKCAQTVSKTDGADAH-IVL 552

  Fly   997 ADAECGHLQKPAEMEPC 1013
            .|..| |.:||.|.|.|
 Worm   553 RDDRC-HFKKPQETETC 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 78..194 CDD:279848
ZnMc_ADAMTS_like 314..518 CDD:239801
Reprolysin 315..521 CDD:279729
ADAM_CR <558..602 CDD:301627
TSP1 614..666 CDD:214559 21/51 (41%)
ADAM_spacer1 773..886 CDD:283607 37/295 (13%)
TSP1 901..956 CDD:214559 20/57 (35%)
madd-4NP_492405.3 TSP1 26..71 CDD:214559 21/51 (41%)
TSP1 382..438 CDD:214559 6/55 (11%)
IGc2 666..723 CDD:197706
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13723
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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