DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-B and adamtsl3

DIOPT Version :9

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:XP_003198947.4 Gene:adamtsl3 / 100534944 ZFINID:ZDB-GENE-121030-8 Length:1760 Species:Danio rerio


Alignment Length:450 Identity:133/450 - (29%)
Similarity:205/450 - (45%) Gaps:67/450 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   597 QNGKCVRREELAAVNGGWGDWSEWSECSRSCGGGVSTQQRECDNPVPANGGVFCIGERKRYKICR 661
            |:.:..|.:|  ..:.||..|..||:|||:||||.|...|.|     .||| .|.|...||:.|.
Zfish    63 QSSRTTRSDE--ERDTGWDAWGTWSDCSRTCGGGASYSLRRC-----LNGG-NCEGRNIRYRTCS 119

  Fly   662 KRPCPAEEPSFRAQQCARFDNVSYQGATYKWLPF-FDKNNPCKLFCSDVDDTIIANWGATVLDGT 725
            ...||.|...||||||:..:::.|||.||:|:|. :|..:||.|.|.......:......|||||
Zfish   120 NTDCPLESGDFRAQQCSAHNDIKYQGQTYEWIPVTYDPVSPCALRCQARGKGQVVELAPKVLDGT 184

  Fly   726 PCTLGTNNMCIDGICKKVGCDWIVDSEVQDDRCGVCGGSGDQCQPVRETYTDPFAAKDGAYVEIV 790
            .|...:.:|||.|||::||||..:.|..::|.||||.|.|..|:.:|.... |..:.:.....::
Zfish   185 RCKADSLDMCISGICQEVGCDRQLGSNAKEDNCGVCAGDGSTCRLIRGQAL-PHVSPEEPIKTVI 248

  Fly   791 TIPARARHILIRELANSPHFLAI-ATGDGGDRFYLNGDSLISMPGEFEIAGAESL------YDRV 848
            .:|..:|.  :|..|..|..:.| |.|....|..::          |..:|:.||      :.|.
Zfish   249 EVPMGSRG--LRITAKGPDMIVIEAHGQNSRREEVH----------FSSSGSHSLGNNTVEFQRG 301

  Fly   849 DEQETITIPQPIQHSISLYAIVRGNESNAGIFYEFTLPALNVTAGRQFQWRLSNWTACSASCGGG 913
            .|::|:....|:....::.....|.:... |.:.|..|.       ::|||.:::..||.:||||
Zfish   302 AERQTLRCYGPLTADFTVKVKYAGPKDTV-IQFMFYQPI-------RYQWRETDFFPCSVTCGGG 358

  Fly   914 VQHREPICQE--NGKALGDTLPCWTHAKNKRPARQSRGCGDQPCP-----------------AHW 959
            .|.....|.:  ..:::.:.| |.:..:|.:|..:.:.|..:|||                 ..|
Zfish   359 YQLNSADCVDIRYNRSVAEHL-CHSFPENTKPTPKLKECNMEPCPESDGFKEVMPYDHFQPLPRW 422

  Fly   960 WPGPWQFCPVTCRPVGFVAPPQRRRSVVCLDE--HD--VVVADAECGHLQKPAEMEPCES 1015
            ...||..|.|:|      ....:.||:||::|  |.  |.|.|.:|.|..:|...:.|.:
Zfish   423 EQNPWTSCSVSC------GGGSQERSIVCVEEDVHGQIVQVEDWKCTHSPRPISKQNCNT 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 78..194 CDD:279848
ZnMc_ADAMTS_like 314..518 CDD:239801
Reprolysin 315..521 CDD:279729
ADAM_CR <558..602 CDD:301627 1/4 (25%)
TSP1 614..666 CDD:214559 22/51 (43%)
ADAM_spacer1 773..886 CDD:283607 21/119 (18%)
TSP1 901..956 CDD:214559 14/56 (25%)
adamtsl3XP_003198947.4 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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