DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AdamTS-B and adamtsl4

DIOPT Version :10

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:XP_002935503.2 Gene:adamtsl4 / 100488255 XenbaseID:XB-GENE-986796 Length:1427 Species:Xenopus tropicalis


Alignment Length:1208 Identity:263/1208 - (21%)
Similarity:392/1208 - (32%) Gaps:384/1208 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GGVRPLYGLHSDELVAGEGQLVVP------------RRVHPDGAFMTHQLEYAHE-------LDH 73
            |..||.|.||:|      |::..|            .|.:|   |..|..:..|.       .:|
 Frog   108 GAARPAYPLHTD------GEIAAPFVDLGAQRHSPALRYNP---FNRHTRQGIHSSGSQPPVQNH 163

  Fly    74 RRHRQRRSLNSEHDTQAADLHLL-----LPLANETLHLELMAHSYFLAPNLVVERHRRDLRT-RS 132
            ......||.:|.  .:||..|..     .||....|..||:|...|       ..||.|.:: .|
 Frog   164 DSSPYHRSTSSR--GRAAARHPQTGWHPAPLETPYLQEELLAPETF-------SMHRNDHQSIPS 219

  Fly   133 PLTTRHLNCHFHGKVRGQPATNVAISTCAGLVGHIRTAGNEYFIEPSKEHEP----HPVNGHPHV 193
            ....|::.....     .||..........|:..          |.|::|.|    .|:......
 Frog   220 SYNRRNITRQVE-----DPAPWPFFPDSIPLLKP----------ESSEDHNPGRSFPPLTPTKES 269

  Fly   194 VFQ-----RSSVK-------------PKHSLRKRNKR-KRGGKSGSGAEVSNCGTREPRRRMETR 239
            .|.     |:|:|             |.|..::.::| ||..||..|      |..|....:|..
 Frog   270 RFSRRSRVRNSIKPGKYGYGKVPFALPLHKDKEESQRFKRHHKSLDG------GATEEEEHLEPT 328

  Fly   240 LEWQARGKVKVQGGRQIRRHHHHHHHHHHKHKYRHHQQKISR---VPHTKFKYETQFQTEPDHAE 301
                   ::.....|::...|:......|..:....:..:|.   :||.......| :|..:|:.
 Frog   329 -------QIPSINDREVYDTHNADSSVIHSPEPSKQKSSLSHKGDLPHHHLPDRKQ-KTVHEHSS 385

  Fly   302 IPRRRRSISSPRHVETLIVADATMSAFHRDLNGYLLTIMNMVSALYKDPSIGNSIEIVVVRIIQL 366
            .|            |||:.....|.     |:|:      ...||..|.|...|:|..|..:..:
 Frog   386 WP------------ETLVNISLLMG-----LSGF------QQKALKGDESRHESMETDVAPVEPV 427

  Fly   367 DEEE-SQLQLNLTQNAQKNLDRFCSWQHKLNKGSEKDPHHHDVAILITRKNICANNCMTLGLANV 430
            .||. |..:....||.|. |.....|      |||||...|                   |..|:
 Frog   428 QEEGLSHRRSQSNQNDQL-LSEIRYW------GSEKDSERH-------------------GDQNI 466

  Fly   431 GGMCKPKQSCSVNEDNGIMLSHTITHELGHNFGMFHDTAKIGCHPRVGPIVHIMTPTFGADTLQV 495
            |...:.:::                     :......|.|:.     .|...::.    ||..|.
 Frog   467 GSEKQVEEA---------------------HLSRIAKTRKVR-----SPNTRVLL----ADEKQA 501

  Fly   496 CWSNCSRKYITHFLDQGLGECLDDPPTPLDEYNYTGELPGM----------------------RY 538
            .....|...::....:.:. ..|:..|..|.||..|:.|.|                      |.
 Frog   502 AVEQKSSSLLSSATAEEIA-AADNSKTQSDVYNRNGDQPFMENRKDIRRISRAKMFGTVKPMQRL 565

  Fly   539 NA--RGQ----------------CRLQFNLT--------TDSEVGACSAPHEFCSTLWCKVNGEC 577
            :|  :||                ..|..::.        :|||:.|..|...             
 Frog   566 DATKKGQNERSPLEGSVLLNERASHLNSHVKKITKHSDGSDSEITADEADQH------------- 617

  Fly   578 VTHMRPTAPGTLCGRNK---------WCQNGKCVR---REELAAVNGGWGDWSEWSECSRSCGGG 630
              |.:..:...|..|::         ...|.:..:   ||..:.......|  .|....||    
 Frog   618 --HHQVASDSVLLPRSRSQRQSQNRHGVDNSRVFQNLFREHPSVHRPAQSD--PWPAFGRS---- 674

  Fly   631 VSTQQRECDNPV-----------------PANGGVFCIGERKRYKICRKRPCPAEEPSFRAQQCA 678
             .|...|.:..|                 ||:....|.||:|:||.|.:..||:.:|..||:.||
 Frog   675 -PTVAHEREQDVGSSLHQNSELPQWNLYNPASEEFHCEGEQKQYKSCNQEACPSGQPDARAKHCA 738

  Fly   679 RFDNVSYQGATYKWLPFFD--KNNPCKLFCSDVDDTIIANWGATVLDGTPCTLGTNNMCIDGICK 741
            .|::..:.|..|:|..|.:  .|..|.|.|..:...........|.|||||..|:.::|:||.|.
 Frog   739 TFNSQEFMGRLYQWEAFTEVSGNQRCALNCRPIGYRFYVRHTEKVQDGTPCEAGSLDVCVDGQCL 803

  Fly   742 KVGCDWIVDSEVQDDRCGVCGGSGDQCQPVRETYTD---PFAAKDGAYVEIVTIPARARHILIRE 803
            ..|||.|:.|....|.||||||.|..|:.:..|:.:   |.     .|.:|:.||..|..|.:||
 Frog   804 SPGCDGILGSNSTLDTCGVCGGDGSTCKFITGTFKETNVPI-----GYHKILEIPKGATQIKVRE 863

  Fly   804 LANSPHFLAIATGDGGDRFYLNGDSLISMPGEFEIAGAESLYDR----VDEQETITIPQPIQHSI 864
            |..||::||:.:..|  :.::||:..:...|.:|..|...:|.:    ..|.||.|...|...::
 Frog   864 LTWSPNYLALRSRTG--KSFINGNWAVDPAGRYEAGGTVFIYTQPGREEQEGETFTAAGPTSEAL 926

  Fly   865 SLYAIVRGNESNAGIFYEFTLPA-----------------------------LNVTAGR------ 894
            .:|.|.:  :.|.||.::|.:.:                             |..|..|      
 Frog   927 DVYMIFQ--QDNPGISFQFFISSPTAADASGHQSNPSQQEYGALRSMSASETLANTGSRTQPPDD 989

  Fly   895 --------------------------------------QFQWRLSNWTACSASCGGGVQHREPIC 921
                                                  ||.|:....||||.|||.|..:  |:.
 Frog   990 RPLVPPPQSRQRPVSTLQRNIRVPPLQSPPVHYWPEQPQFFWKRVGSTACSVSCGKGFWY--PVY 1052

  Fly   922 Q-ENGKALGDTLPCWTHAKNKRPARQSRGCGDQPCPAHWWPGPWQFCPVTCRPVGFVAPPQRRRS 985
            | .:..:|.:.........|| |..|...|..|||||.|..|.|..|..||      ....:.|.
 Frog  1053 QCVSRNSLEEVSEEECDLSNK-PFPQEEACNTQPCPAFWDVGNWSVCSRTC------GNGIQHRQ 1110

  Fly   986 VVCLD---EHDVVVADAECGHLQKPAEMEPCESSLPIC 1020
            |:|..   ....:|....|.||.||...:.|:  |.||
 Frog  1111 VLCRQMYANRTTMVHPQRCSHLVKPNVTQTCQ--LRIC 1146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 47..195 CDD:460254 33/176 (19%)
ZnMc_ADAMTS_like 314..518 CDD:239801 37/204 (18%)
ADAMTS_CR_2 534..602 CDD:465496 16/124 (13%)
TSP1 614..666 CDD:214559 16/68 (24%)
ADAMTS_CR_3 672..768 CDD:437068 37/97 (38%)
ADAMTS_spacer1 770..886 CDD:461796 33/122 (27%)
TSP1 901..956 CDD:214559 18/55 (33%)
TSP1_ADAMTS 959..1020 CDD:465950 17/63 (27%)
adamtsl4XP_002935503.2 TSP1 45..>77 CDD:214559
ADAMTS_CR_3 729..830 CDD:437068 38/100 (38%)
ADAMTS_spacer1 832..945 CDD:461796 33/121 (27%)
TSP1_ADAMTS 1037..1086 CDD:465950 17/51 (33%)
TSP1_ADAMTS 1090..1146 CDD:465950 17/63 (27%)
TSP1_ADAMTS 1149..1203 CDD:465950
TSP1_ADAMTS 1207..1260 CDD:465950
TSP1_ADAMTS 1266..1322 CDD:465950
TSP1_ADAMTS 1326..1377 CDD:465950
PLAC 1385..1414 CDD:462560
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.