DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AdamTS-B and adamts18

DIOPT Version :9

Sequence 1:NP_572247.2 Gene:AdamTS-B / 31490 FlyBaseID:FBgn0029791 Length:1023 Species:Drosophila melanogaster
Sequence 2:XP_009301678.1 Gene:adamts18 / 100150128 ZFINID:ZDB-GENE-070815-1 Length:1244 Species:Danio rerio


Alignment Length:1017 Identity:345/1017 - (33%)
Similarity:503/1017 - (49%) Gaps:123/1017 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GLHSDELVAGEGQLVVPRRVHPDGAFMTHQLEYAHELDHRRH-RQRRSLNSEHDTQAADL-HLLL 97
            ||:.|.      ....|..|...|.:::|        |..|| |.||||     ::|..| |..:
Zfish    59 GLYQDY------DFATPVEVDSYGGYISH--------DVSRHGRSRRSL-----SEAGSLVHYHV 104

  Fly    98 PLANETLHLELMAHSYFLAPNLVVERHRRDLRTRSPLTTRHLNCHFHGKVRGQPATNVAISTCAG 162
            ....:.|||:|.. |:.||....|:....:....:.|.....||.:.|.:|....::||:|||.|
Zfish   105 SAFGKELHLDLQP-SHVLAEGFTVQTLGAEGINTATLDPSIHNCFYQGSIRNHSDSSVALSTCTG 168

  Fly   163 LVGHIRTAGNEYFIEPSKEH------EPHPVNGHPHVVFQRSSVKPKHSLRKRNKRKRGGKSGSG 221
            |.|.||.:..|.||.|..:|      ...|...||||:::||:.:..|:  .:..|....||.:.
Zfish   169 LSGLIRYSSEELFITPLPQHLALQHNYSAPSGHHPHVIYKRSAERRVHA--DKTDRTSRFKSSNP 231

  Fly   222 AEVSNCGTREPRRRMETRLEWQARGKVKVQGGRQIRRHHHHHHHHHHKHKYRHHQQKISRVPHTK 286
            .|                                   .||||||||..|.|:|.:.:.......:
Zfish   232 YE-----------------------------------DHHHHHHHHRHHDYQHGKLQRQHFCGRR 261

  Fly   287 FKYETQFQTE-----PDHAE--IPRRRRSISSPR----HVETLIVADATMSAFH-RD-LNGYLLT 338
            .:|..:..||     ||..|  |..:|..|:|.:    :||||:|||..|...| || :..|:||
Zfish   262 KQYTPKPPTEDHFVMPDEFEQQIRVKRSEITSSKEGGLNVETLVVADRKMLEKHGRDNVTTYVLT 326

  Fly   339 IMNMVSALYKDPSIGNSIEIVVVRIIQLDEEESQLQLNLTQNAQKNLDRFCSWQHKLNKGSEKDP 403
            :|||||:|:||.:|||.|.||||.::.|  |:..|.|::..:|.::|:.||.||..|   ..|:.
Zfish   327 VMNMVSSLFKDGTIGNDINIVVVSLLLL--EKDPLGLSINHHADQSLNSFCQWQSGL---VGKNG 386

  Fly   404 HHHDVAILITRKNICA---NNCMTLGLANVGGMCKPKQSCSVNEDNGIMLSHTITHELGHNFGMF 465
            ..||.|||:|..:||:   ..|.|||.|.:.|||...:||::|||.|:.|:.||.||.||||||.
Zfish   387 KRHDHAILLTGLDICSWKNEPCDTLGFAPISGMCSKYRSCTINEDTGLGLAFTIAHESGHNFGMI 451

  Fly   466 HDTAKIGCHPRVGPIVHIMTPTFGADTLQVCWSNCSRKYITHFLDQGLGECLDDPPTPLDEYNYT 530
            ||.....|....|   :||:||...:.....||.|||:|:..||......||.|.|..:.:|.|.
Zfish   452 HDGEGNPCRKTEG---NIMSPTLAGNNGVFSWSACSRQYLNRFLGTAQASCLVDEPKQIGQYKYP 513

  Fly   531 GELPGMRYNARGQCRLQFNLTTDSEVGACSAP--HEFCSTLWCKVNG-ECVTHMRPTAPGTLCGR 592
            .:|||..|:|..||:.||.    |:...|...  .:.|.:|||...| .|.|...|.|.||:||.
Zfish   514 EQLPGQLYDADIQCKWQFG----SKAKLCGLDFVKDICKSLWCHRTGHRCETKFMPAAEGTICGA 574

  Fly   593 NKWCQNGKCVRREELA--AVNGGWGDWSEWSECSRSCGGGVSTQQRECDNPVPANGGVFCIGERK 655
            :.||:.|:||:..:..  ||:|.|..|||||:|||:|||||..::|.|::|.|.:.|.||.|..:
Zfish   575 DMWCRKGQCVKFGDHGPKAVHGQWSGWSEWSDCSRTCGGGVMYRERSCNSPSPQHNGKFCQGPGR 639

  Fly   656 RYKICRKRPCPAEEPSFRAQQCARFDNVSYQGATYKWLPF--FDKNNPCKLFCSDVDDTIIANWG 718
            .:::|..:||..:...|||||||.:::..::|..|||.|:  .::.:.|||:|...|........
Zfish   640 LHQLCNTKPCQPDGVDFRAQQCAEYNSKPFRGWYYKWKPYTKVEEEDICKLYCIAEDFDFFFAMS 704

  Fly   719 ATVLDGTPCTLGTNNMCIDGICKKVGCDWIVDSEVQDDRCGVCGGSGDQCQPVRETYTDPFAAKD 783
            :.|.|||.|:.....:||||||:.||||.::.|:...|.||||.|....|:.....||....|.:
Zfish   705 SKVKDGTSCSDYKGGVCIDGICEPVGCDQVLGSKAALDACGVCKGDNSTCKFYSGQYTLQHRANE 769

  Fly   784 GAYVEIVTIPARARHILIRELANSPHFLAIATGDGGDRFYLNGDSLISMPGEFEIAGAESLYDR- 847
              |..:|.:||.||.|.::|:..|..:||:.:...| .:||..|..:..||.|:.||....|.| 
Zfish   770 --YYPVVMVPAGARSIQVQEMEISNSYLAVRSLKRG-TYYLTADWTVDWPGRFQFAGTTFNYQRS 831

  Fly   848 VDEQETITIPQPIQHSISLYAIVRGNESNAGIFYEFTLPALNVTAGRQFQWRLSNWTACSASCGG 912
            .:..||:....|...::....:::|  .|.||.:|:|||  :......:.|.:.. :.|||.|.|
Zfish   832 FNRPETLFATGPTNETLLFEILLQG--KNPGITWEYTLP--HPEKKHNYTWSVVR-SDCSAPCAG 891

  Fly   913 GVQHREPICQENGKALGDTLPCWTHAKNKRPARQSRGCGDQPCPAHWWPGPWQFCPVTCRPVGFV 977
            |....:.||.::.:...::..|   ....||...|..|..|||||:|..|.|..|..||      
Zfish   892 GRVSTKAICLQDQQTQVNSSLC---NPQTRPVVGSHLCNTQPCPAYWTTGKWGVCSRTC------ 947

  Fly   978 APPQRRRSVVCLD----EHDVVVADAECGHLQKPAEMEPCES 1015
            ...|:.|::.||.    :.:.|.|.:.| .:..||:::||.:
Zfish   948 GGGQQTRNIRCLRKVTYQREEVAAQSLC-PVMAPAQLQPCNT 988

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-BNP_572247.2 Pep_M12B_propep 78..194 CDD:279848 39/122 (32%)
ZnMc_ADAMTS_like 314..518 CDD:239801 92/208 (44%)
Reprolysin 315..521 CDD:279729 94/210 (45%)
ADAM_CR <558..602 CDD:301627 17/46 (37%)
TSP1 614..666 CDD:214559 24/51 (47%)
ADAM_spacer1 773..886 CDD:283607 34/113 (30%)
TSP1 901..956 CDD:214559 15/54 (28%)
adamts18XP_009301678.1 Pep_M12B_propep 86..206 CDD:279848 41/125 (33%)
ZnMc_ADAMTS_like 299..500 CDD:239801 91/208 (44%)
Reprolysin 301..504 CDD:279729 94/210 (45%)
TSP1 598..649 CDD:214559 23/50 (46%)
ADAM_spacer1 755..868 CDD:283607 34/117 (29%)
TSP1 935..992 CDD:214559 17/61 (28%)
TSP1 995..1053 CDD:214559
TSP1 1060..1120 CDD:214559
TSP1 1142..1189 CDD:214559
PLAC 1210..1240 CDD:285849
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 210 1.000 Domainoid score I2752
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D125522at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25151
orthoMCL 1 0.900 - - OOG6_100241
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.720

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