DRSC/TRiP Functional Genomics Resources

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Protein Alignment HMGB3 and D

DIOPT Version :10

Sequence 1:NP_001427702.1 Gene:HMGB3 / 3149 HGNCID:5004 Length:222 Species:Homo sapiens
Sequence 2:NP_524066.1 Gene:D / 39570 FlyBaseID:FBgn0000411 Length:382 Species:Drosophila melanogaster


Alignment Length:68 Identity:24/68 - (35%)
Similarity:41/68 - (60%) Gaps:0/68 - (0%)


- Green bases have known domain annotations that are detailed below.


Human   116 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVA 180
            |||.:.|.::....|.:|...||.:...:::|:||..|..|.:|||:|:|.:|.:|:..:.|:..
  Fly   143 KRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKEHP 207

Human   181 DYK 183
            |||
  Fly   208 DYK 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HMGB3NP_001427702.1 None
DNP_524066.1 HMG-box_SoxB 140..219 CDD:438790 24/68 (35%)

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