Protein Alignment HMGB3 and HmgD

DIOPT Version :10

• Sequence 1: NP_001427702.1
• Gene: HMGB3 / 3149
• HGNCID: 5004
• Length: 222
• Species: Homo sapiens
• Sequence 2: NP_726109.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Alignment Length: 110
• Identity: 41/110 - (37%)
• Similarity: 66/110 - (60%)
• Gaps: 7/110 - (6%)

Human   115 PKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDV 179
            ||||.|.:.|:.:..|..||..||||.:.:|||:.||:|..:.|  |..:..||||.|:.|::.|
  Fly     5 PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD--KSEWEAKAAKAKDDYDRAV 67

Human   180 ADYKSKG-----KFDGAKGPAKVARKKVEEEDEEEEEEEEEEEEE 219
            .::::.|     ...|||..||.|:|..::..:||.:|::::|.|
  Fly    68 KEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKEESDEDDDDESE 112

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HMGB3	NP_001427702.1	None
HmgD	NP_726109.1	HMG-box_SSRP1-like	7..71	CDD:438810	26/65 (40%)