DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3149 and RFT1

DIOPT Version :9

Sequence 1:NP_572246.1 Gene:CG3149 / 31489 FlyBaseID:FBgn0027564 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_443091.1 Gene:RFT1 / 91869 HGNCID:30220 Length:541 Species:Homo sapiens


Alignment Length:552 Identity:204/552 - (36%)
Similarity:290/552 - (52%) Gaps:43/552 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ARNVLESSLLGAGFSIIFQILCRILTFGINAYIVRHVGREVLGIMNVRLLLLESTLLFLSREAIN 66
            ::.||..:...|...::.|:|.|::||.:||:|:|.:.:|::|::||||.||.||.|||:|||..
Human     3 SQEVLGHAARLASSGLLLQVLFRLITFVLNAFILRFLSKEIVGVVNVRLTLLYSTTLFLAREAFR 67

  Fly    67 RAALSANAQQGDRCSWAQLINQMWLTVPICAVLCAPCLYIWLNWLSAVDAIYASQYEFACYAVAF 131
            ||.||...|:    .|:|.:|.:|||||:.........:|||..|...|......|.........
Human    68 RACLSGGTQR----DWSQTLNLLWLTVPLGVFWSLFLGWIWLQLLEVPDPNVVPHYATGVVLFGL 128

  Fly   132 SCVLELMAESAVFVAQVFCFVKLKILLNTLHILVRSAIFLWIVTGDRSAAINAFAIAQLSSAVTI 196
            |.|:||:.|....:||...|||||::..:|.::::|.:..::|.......:..|::|||.....:
Human   129 SAVVELLGEPFWVLAQAHMFVKLKVIAESLSVILKSVLTAFLVLWLPHWGLYIFSLAQLFYTTVL 193

  Fly   197 VLGQYGFFYFYLKGFKDFVTQQAKKKPVAPKAWQVSLYEHMDDFPFKQLSDFLPGVMFNPNGKHF 261
            || .|..::..|.|           .|.:.|         :...|..:::|.||.:  ..||...
Human   194 VL-CYVIYFTKLLG-----------SPESTK---------LQTLPVSRITDLLPNI--TRNGAFI 235

  Fly   262 NRELQTLTLSFVKQGVLKQILTEGEKYVMSVSPVLSFGEQATYDVVNNLGSMAARFIFRPIEDSS 326
            |.:...||.||.||..|||||||||:|||:...||:||:|..||:||||||:.||.||:|||:|.
Human   236 NWKEAKLTWSFFKQSFLKQILTEGERYVMTFLNVLNFGDQGVYDIVNNLGSLVARLIFQPIEESF 300

  Fly   327 YFYFTQTLSRDIKLAKQPQERVRQASSVLNNLLLGVSSIGLIAFTFGQSYSYPVLLLYGGPDFVA 391
            |.:|.:.|.|......|.||.|..|::||.:||......||....||.:||...|.:|||....:
Human   301 YIFFAKVLERGKDATLQKQEDVAVAAAVLESLLKLALLAGLTITVFGFAYSQLALDIYGGTMLSS 365

  Fly   392 GGLPQSLLQWHCLAIYLLAVNGISEGYMFATNTSRDIDKYNYLMAIFSVSFLVLSYILTGIFGPV 456
            |..| .||:.:||.:.|||:||::|.:.||..:..::|:||::|...|.|||||||:||...|.|
Human   366 GSGP-VLLRSYCLYVLLLAINGVTECFTFAAMSKEEVDRYNFVMLALSSSFLVLSYLLTRWCGSV 429

  Fly   457 GFIFANCINMLSRILYSTYYIRHQYRPLSLDPLLGLWPGKLFGCTLFLAG---------IVCYWY 512
            |||.|||.||..||..|..:|...||.....||.||....:...|..|:|         :.|...
Human   430 GFILANCFNMGIRITQSLCFIHRYYRRSPHRPLAGLHLSPVLLGTFALSGGVTAVSEVFLCCEQG 494

  Fly   513 QSSDLATHLGVGVLA-----GLACLLSWALAH 539
            ..:.|| |:.||...     |.|.|....|.|
Human   495 WPARLA-HIAVGAFCLGATLGTAFLTETKLIH 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3149NP_572246.1 Rft-1 8..547 CDD:282375 202/546 (37%)
RFT1NP_443091.1 Rft-1 11..524 CDD:282375 200/541 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155523
Domainoid 1 1.000 309 1.000 Domainoid score I1342
eggNOG 1 0.900 - - E1_KOG2864
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5343
Inparanoid 1 1.050 309 1.000 Inparanoid score I2620
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54409
OrthoDB 1 1.010 - - D338482at33208
OrthoFinder 1 1.000 - - FOG0004239
OrthoInspector 1 1.000 - - oto88519
orthoMCL 1 0.900 - - OOG6_103267
Panther 1 1.100 - - LDO PTHR13117
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4039
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.770

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