DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3149 and rft1

DIOPT Version :9

Sequence 1:NP_572246.1 Gene:CG3149 / 31489 FlyBaseID:FBgn0027564 Length:556 Species:Drosophila melanogaster
Sequence 2:XP_688354.3 Gene:rft1 / 559873 ZFINID:ZDB-GENE-110411-126 Length:540 Species:Danio rerio


Alignment Length:568 Identity:203/568 - (35%)
Similarity:313/568 - (55%) Gaps:47/568 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ARNVLESSLLGAGFSIIFQILCRILTFGINAYIVRHVGREVLGIMNVRLLLLESTLLFLSREAIN 66
            :.:||:|:...|.::::.|::.|:|||.:||:.:|.|.:|::|::||||:||.|||:||||||..
Zfish     3 SEDVLKSASTLASYNVLLQVMFRVLTFLLNAFTLRFVSKELIGVVNVRLMLLYSTLVFLSREAFR 67

  Fly    67 RAALSANAQQGDRCSWAQLINQMWLTVPICAV--LCAPCLYIWLNWLSAVDAIYASQYEFACYAV 129
            ||.||.   :|...:|.|:||.:|||.|:..|  :...|::.|:  |.|.|......|..|....
Zfish    68 RACLSG---EGAGRNWRQVINLLWLTFPLGCVWGVLLVCVWWWV--LQAPDPDSIPHYVPAVGLF 127

  Fly   130 AFSCVLELMAESAVFVAQVFCFVKLKILLNTLHILVRSAIFLWIVTGDRSAAINAFAIAQLSSAV 194
            ..:.:.||:||....:|....||:||::..:|.::.:..:.:.:|.......:..|:.|| ....
Zfish   128 CVAALTELLAEPLWVLAHAHMFVRLKVIAESLAMIAKCLVTVVLVVSAPQWGLFIFSAAQ-CVYT 191

  Fly   195 TIVLGQYGFFYFYLKGFKDFVTQQAKKKPVAPKAWQVSLYEHMDDFPFKQLSDFLPG-VMFNPNG 258
            ..:|..|..::.:..|     :::|:||                .||..:::|.||. |...|  
Zfish   192 GFLLTCYVVYFIHFLG-----SEEAEKK----------------SFPVYRMTDLLPSKVDHEP-- 233

  Fly   259 KHFNRELQTLTLSFVKQGVLKQILTEGEKYVMSVSPVLSFGEQATYDVVNNLGSMAARFIFRPIE 323
             ..|.:|.|||.||.||..|||||||||:|||:...||:||:|..||::||||||.|||:|.|||
Zfish   234 -LLNWKLTTLTWSFFKQSFLKQILTEGERYVMTFLNVLNFGDQGVYDIINNLGSMVARFLFLPIE 297

  Fly   324 DSSYFYFTQTLSRDIKLAKQPQERVRQASSVLNNLLLGVSSIGLIAFTFGQSYSYPVLLLYGGPD 388
            :|.|.:|.:.|.|...:..|.||.|..|:.||..||..|..||||...||.:||:..|.:||| :
Zfish   298 ESFYVFFAKVLERGRDVQHQKQEEVSMAAEVLECLLKLVLLIGLIITVFGYAYSHLALDIYGG-E 361

  Fly   389 FVAGGLPQSLLQWHCLAIYLLAVNGISEGYMFATNTSRDIDKYNYLMAIFSVSFLVLSYILTGIF 453
            .::.|...:||:.:...:.|||:||::|.::||..:..::|:||.:|...|.|||:|||.||.:|
Zfish   362 LLSNGAGPALLRCYSCYVLLLAINGVTECFVFAAMSKEEVDRYNLVMLGLSASFLLLSYWLTWMF 426

  Fly   454 GPVGFIFANCINMLSRILYSTYYIRHQYRPLSLDPLLGLWPGKLFGCTLFLAGIVCYWYQSSDLA 518
            |.||||.|||.||..||.:|..|||..:......||.||.|.......|.::.::..:.:|....
Zfish   427 GGVGFILANCCNMALRITHSIVYIRQYFLQSEHRPLWGLRPHSAVLVALGVSAVITAFSESVFCC 491

  Fly   519 T--------HLGVGVLAGLACLLSWALAHRDLV-----RLAWRYGRRI 553
            .        |:.||.:..|..:::..|....||     :|..:|.:::
Zfish   492 DGGWLLRLFHVAVGAVCLLTVVITVFLTETRLVQFVKTQLLPKYNKKL 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3149NP_572246.1 Rft-1 8..547 CDD:282375 200/554 (36%)
rft1XP_688354.3 Rft-1 14..528 CDD:282375 198/544 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590689
Domainoid 1 1.000 308 1.000 Domainoid score I1320
eggNOG 1 0.900 - - E1_KOG2864
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5343
Inparanoid 1 1.050 312 1.000 Inparanoid score I2571
OMA 1 1.010 - - QHG54409
OrthoDB 1 1.010 - - D338482at33208
OrthoFinder 1 1.000 - - FOG0004239
OrthoInspector 1 1.000 - - oto39517
orthoMCL 1 0.900 - - OOG6_103267
Panther 1 1.100 - - LDO PTHR13117
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1092
SonicParanoid 1 1.000 - - X4039
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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