DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGAP1 and Pgap1

DIOPT Version :9

Sequence 1:NP_572245.1 Gene:PGAP1 / 31487 FlyBaseID:FBgn0029789 Length:980 Species:Drosophila melanogaster
Sequence 2:NP_973719.1 Gene:Pgap1 / 316400 RGDID:1303213 Length:922 Species:Rattus norvegicus


Alignment Length:1018 Identity:253/1018 - (24%)
Similarity:435/1018 - (42%) Gaps:222/1018 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GLFRLHVEVEPNACRMTYMFGEPMFAKVGV--RDGDQYPNYALYYYYEGL---RQPLDPLKRRMT 81
            ||:.:....|.|.|.|:|||..|.:.|:.:  :...:||.|.||.|.||.   ...:.||    |
  Rat    24 GLWDVFFGFEENKCSMSYMFEYPEYQKIELPKKLTKRYPAYELYLYGEGSYAEEHKILPL----T 84

  Fly    82 GAPVIFVPGNAGSYKQVRSLASVALRKAMSNDAGIHLDYYTIDYDEELSALYGGYLHRQQSYLKL 146
            |.||:|:||||||||||||:.|:|||||...|...|.|:::::::|||.|||||.|.:|..::..
  Rat    85 GIPVLFLPGNAGSYKQVRSIGSIALRKAEDIDFKYHFDFFSVNFNEELVALYGGSLQKQTKFVHE 149

  Fly   147 CIRTILSIYEGRTEQP-SIVLIGHSMGGKLAQSVLVDPAIGQH-INTIISISTPLDQPVLNLDTQ 209
            ||:.||.:|:|:...| |:.:|||||||.:|:::|......|. ||.:::.:||...||:.||..
  Rat   150 CIKAILKLYKGQEFPPTSVAIIGHSMGGLVARALLTLKNFKQDLINLLVTQATPHVAPVMPLDRF 214

  Fly   210 LEEFYDQTDAVLSKLRTATVPTMTTNVCDSLHQRPPSVQRMASQDSSARLDNVLLISTGGGNRDL 274
            :.|||                 ||.|....|               :||..|:..:|..||.||.
  Rat   215 ITEFY-----------------MTVNNYWIL---------------NARHINLTTLSVAGGFRDY 247

  Fly   275 LVRPGLT-----SSRFNDLHAMTSAIPKVSLSCDHLSAVWCLQFMQAINRFLFSVAYVREDRSSI 334
            .||.|||     |...:.|..:|||:||..:|.||||.|||.|......|..|.:  :..|...|
  Rat   248 QVRSGLTFLPTLSHHTSALSVVTSAVPKTWVSTDHLSIVWCKQLQLTTIRAFFDL--IDADTKQI 310

  Fly   335 AFGTNKQRNLQTALS-TFVKPRRRQQNTVRFGAAGNWHEERRLVINKYFTNGLKGT--------- 389
               |.|.:...:.|: .|::                 |..::...|....:.|.||         
  Rat   311 ---TQKSKKKLSVLNHHFIR-----------------HPAKQFEENPSIISDLTGTSMWVPVKVS 355

  Fly   390 -------------FFDLIGLQRQERYRKAAIEALNVDDEDWLFGCSAEDNNKTGQLYCEKATSLM 441
                         :|.......::.|..|..::..:|...|:|||.    |.|..  |.:...|.
  Rat   356 RWSYVAYNESDKIYFAFPLANHRKVYTHAYCQSTMLDTNSWIFGCI----NSTSM--CRQGVDLS 414

  Fly   442 HLVQWLPNEDREPRSIALLDLHNLRKTYVHWTHLLVRLPPSAKRIGYNLDIYDPKERVTDIKMPR 506
            ...:.||       :|..|.|.  .:.|...:|::|.: ||.....:.:|....|:....|::|.
  Rat   415 WKAELLP-------TIKSLTLR--LQDYPSLSHIVVYV-PSVHGSKFVVDCEFFKKEARSIQLPV 469

  Fly   507 WYTM-----AKLPLINETLQGTLHHRVRISEMVDPYQSIRVIVEPLQCINPEYRVTA--RICVPW 564
            .:..     ::..:||.:.:   ::.:.:..:...||:.:|.|.. :|...:..:|:  ::.:||
  Rat   470 THLFSFGLSSRKAIINTSGR---YYNIELLNLGQIYQAFKVNVVS-KCTGGKEEITSIYKLHIPW 530

  Fly   565 AAGFERFQTL----KSFDQKPQLYVNVPTLVPRHYNTTLNPVTLELYLDPTCRYRISYEYSYSSA 625
            :  :|...|:    .|.|...:|:|..|       ....:...|::|....|:|.::.:.|:...
  Rat   531 S--YEDSLTIAQVPSSVDISLKLHVAQP-------ENDSHVALLKMYTSSDCQYEVTIKTSFPQI 586

  Fly   626 LSRLVLEFYGWLPAHLVCVLLIVLRKQVETF------YDVGTF--RSLRPY------------VG 670
            |.::|....|.|||::|..:|:....|:.:.      .:.||.  :..:||            :|
  Rat   587 LGQVVRFHGGALPAYVVSSILLAYGGQLYSLLSTGFCLEYGTMLDKEAKPYKVDPFVIMIKFLLG 651

  Fly   671 YLQYTSLYIVTACRLLKKLIISSR--VFPEPEPLDYSINVSIVIH----CAAIALSLLATLGTWL 729
            |..:..|:.......|..::::|:  .||         .||:::.    |.|....||::....|
  Rat   652 YKWFKELWDAVLLPELDAIVLTSQSMCFP---------LVSLILFLFGTCTAYWSGLLSSASVQL 707

  Fly   730 ALTLYGNAFYRLALRITRLSQATSNVMISIMTHLPITYGILTIATAMGTCSGVGLLLAFVFYFLM 794
            ..:|:      |||:  |.::...:|.: :...||: ..::.:..:..||..:.:||::::|...
  Rat   708 LSSLW------LALK--RPAELPKDVKV-MSPDLPV-LTVVFLIISWTTCGALAILLSYLYYVFK 762

  Fly   795 LSNAYKDYLEDFLWQKAANLVRGKPSAVTEQEDATEEQNEEQNALKQNDEQKQQQQEEEEPEACV 859
            :.:         |..........:|........:.::.|..:::..||........|:       
  Rat   763 VVH---------LQASLTTFKNNQPVNPKHSRRSEKKSNHHKDSAIQNPRLSANDAED------- 811

  Fly   860 GLQNFSFHVTLLLMLFVQLLLNAPSSLAWLRSRRHGINL-PDPS------LYPSIVVLASL---- 913
               :...|.|::.:|...:||:.||.:.|.::.|:...| |||.      |.|:|.||.:.    
  Rat   812 ---SLRMHSTVINLLTWVVLLSMPSLIYWSKNLRYYFKLNPDPCKPLAFLLIPAIAVLGNTHTVS 873

  Fly   914 ---SLLLQLRAPQKCQGYWMLSIAFYILAGVVLLYCQAAIYRL 953
               |.||      |....:.|.:|..::|     :..:.:||:
  Rat   874 IKSSKLL------KTASQFPLPLAVGVIA-----FGSSHLYRV 905

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGAP1NP_572245.1 PGAP1 79..324 CDD:285110 100/251 (40%)
Pgap1NP_973719.1 PGAP1 82..302 CDD:369540 102/255 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 776..801 2/24 (8%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334394
Domainoid 1 1.000 159 1.000 Domainoid score I4005
eggNOG 1 0.900 - - E1_KOG3724
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41605
Inparanoid 1 1.050 222 1.000 Inparanoid score I3445
OMA 1 1.010 - - QHG45558
OrthoDB 1 1.010 - - D210215at33208
OrthoFinder 1 1.000 - - FOG0004158
OrthoInspector 1 1.000 - - oto97638
orthoMCL 1 0.900 - - OOG6_106919
Panther 1 1.100 - - LDO PTHR15495
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2907
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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