DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGAP1 and SPAC824.02

DIOPT Version :9

Sequence 1:NP_572245.1 Gene:PGAP1 / 31487 FlyBaseID:FBgn0029789 Length:980 Species:Drosophila melanogaster
Sequence 2:NP_593441.1 Gene:SPAC824.02 / 2542981 PomBaseID:SPAC824.02 Length:1142 Species:Schizosaccharomyces pombe


Alignment Length:1165 Identity:250/1165 - (21%)
Similarity:432/1165 - (37%) Gaps:331/1165 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RNCAVLLVIGSICCFIYGLFRLHVEVEPNACRMTYMFGEPMFAKVGVRDGDQYP----NYALYYY 65
            |:.::.:.|.:|...:..|.......:.|.|..:|::  |.:.:. |...::|.    .|:||.|
pombe    80 RSWSLYVAIIAILLLLVILHSFQGRPQDNGCGKSYVW--PSYVRF-VDFDERYTRFANKYSLYLY 141

  Fly    66 YE-GLRQPLDPLKRRMTGAPVIFVPGNAGSYKQVRSLASVALR---KAMSNDAGIHL-------D 119
            .| .:.:..:|     :|.|::|:|||||||||||:.|:.|..   .|.:.||...|       |
pombe   142 REKSVEESDEP-----SGIPILFIPGNAGSYKQVRAFAAQAAHVYANAYAEDADGTLNAGKLVPD 201

  Fly   120 YYTIDYDEELSALYGGYLHRQQSYLKLCIRTILSIY------------EGRTEQPSIVLIGHSMG 172
            ::.:|::|:.||.:|..|..|..|:...|..|||:|            |......|::|:|||||
pombe   202 FFVVDFNEDFSAFHGQTLLDQAEYVNDAIPYILSLYRQNRKISSEYDNEAFPPPTSVILLGHSMG 266

  Fly   173 GKLAQSVL-----VDPAIGQHINTIISISTPLDQPVLNLDTQLEEFYDQTDAVLSKLRTATVPTM 232
            |.:||:..     ||.:    :||:|:::||.....|..|..|.|||:                 
pombe   267 GIVAQATFTMKNYVDGS----VNTLITLATPHAMAPLPFDRHLVEFYE----------------- 310

  Fly   233 TTNVCDSLHQRPPSVQRMASQD-----SSARLDNVLLISTGGGNRDLLVRPGLTS-SRF----ND 287
                         |::...||.     ....||:|||:|..||..|..|.|..:| |.|    |.
pombe   311 -------------SIKNFWSQSFLLSPEENSLDDVLLVSIAGGGLDTHVVPEYSSISTFVPPSNG 362

  Fly   288 LHAMTSAIPKVSLSCDHLSAVWCLQFMQAINRFLFSVAYVREDRSSIAFGTNKQ---------RN 343
            |...||.||.|....||.:..||..|.:.:.|.:|::...|..:.:::....|:         .:
pombe   363 LMVFTSGIPSVWAEIDHQAMAWCENFRRVLIRGIFAIMDARTSKCTVSLNLRKELLSRAYIQGSS 427

  Fly   344 LQTALSTFVKPRRRQQNTVRFGAAGNWHE--ERRLVINKYFTNGLKGTFFDL----IGLQRQERY 402
            .|..::...|| ..|...:.......:.|  .:.|.:|:...:.::...|.:    ..:.|.|..
pombe   428 FQNDITQISKP-IAQYKALDLDLTYVYSEMPGQLLFLNQLGVSYIRHHIFPIPKPTSSIDRFELL 491

  Fly   403 RKAAIE---------ALNVDD--EDWLFGCSAEDNNKTGQLYCEKATSLMHLVQWLPNEDREPRS 456
            ....|:         |..:|.  ::.:.......|||.....|.....|:.|:         |.|
pombe   492 TDQPIDLSSSNIKVLACRLDPKIDNTISALLENGNNKVINANCHLLRELVTLL---------PAS 547

  Fly   457 IALL-------DLHN--LRKTYVHWTHLLV-----RLPPSAKRIG--YNLDIYDPK----ERVTD 501
            .|..       ..:|  |.|..:...|.::     :.|.|...:|  .|:.: |||    .::..
pombe   548 TAYTSSPYGGDSFYNYVLPKEKMDDYHFILVSDDSKAPASGFVVGGFSNVSL-DPKTIKGSQIEL 611

  Fly   502 IKMPRWYTMAKLPLINETLQGTLHHRVR---ISEMVDPYQSIRVIVEPLQCINPEYRVTARICVP 563
            .|..|.:..        ..:|::..|.|   |...:..| :|.|..|......|:...|..:   
pombe   612 FKSGRKFQF--------DTKGSISKRFRFPGIQSSIMAY-TISVTYELYPGAVPQKEFTPML--- 664

  Fly   564 WAAGFERFQTLKS-FDQKPQLYVNVPTLVPRHYNTTLN-----------------PVTLELYLDP 610
                   .|:::| |:.|  .:||:.       ||.|:                 .:|||.:|:|
pombe   665 -------KQSIESPFETK--YHVNMS-------NTELSVHGISPFMEFFGKESEKSLTLEFFLNP 713

  Fly   611 TCRYR---ISYEYSYSSALSRLVLEFYGWLPAHLVCVLLIVLRKQVETFYDVGTFRSLRPYVGYL 672
            .. |:   :|.:.||..:..||::.:...|.:..|.|:.:....|         ||       |.
pombe   714 AI-YKSVYVSIQPSYYRSAGRLLMRYRTLLASFPVVVISLAAYNQ---------FR-------YF 761

  Fly   673 QYTSLYIVTACRLLKKLIISSRVFPEPEPLDYSINVSIVIHCAAIALSLLAT------------L 725
            .|.|.|:..:..|  :::|...:          |.:..::...:||.|.|.:            :
pombe   762 HYGSAYLSMSAAL--EVMIRKGL----------IKLLFLVSILSIAFSYLISRVELIVADGADPV 814

  Fly   726 GTW----------------LALTLYGNAFYRLALRITRLSQA---TSNVMISIMTH-LPITYGIL 770
            .:|                |...|....|:.||..:|.:...   |::|:|..:.| |...|||.
pombe   815 ASWKIFAMMVPKSFWKQNHLLFGLQTAQFWFLAPLLTLMFVGLVITASVIILCVMHLLAFIYGIY 879

  Fly   771 TIATAMGTCSGVGLLLAFVFYFLMLSNAYK-DY-----LEDFLWQKAANLVRGKPS--------- 820
            .....: |.:||...:.|.|..|...|..| |:     |..||.|:  |:....||         
pombe   880 LRYKGL-TFTGVCQAVKFSFQCLRTRNTRKLDHGEFKKLSSFLSQR--NMYYANPSLCYVYGKKH 941

  Fly   821 ---------------------------AVTEQEDATEEQNEEQNALKQNDEQKQQQQEEEEPEAC 858
                                       |:..|...|.:.........::...:::..:       
pombe   942 MQARIIGIMLLLLMAMTVVPFQLVYGVALCTQTVTTAKALHLARFCTKSSHYRKKLWD------- 999

  Fly   859 VGLQNFSFHVTLLLMLFVQLLLNAPSSLAWLRSRRHGINLPDP------SLYPSIV---VLASLS 914
              ..|||..:|:|::|...  |:.|..:.|.|:.....::|.|      |:.|.|:   :|.:..
pombe  1000 --FYNFSCTITILMLLLAP--LDFPVLIVWARNLSMHWSIPFPTHHNFFSIIPFILLTEILRTGK 1060

  Fly   915 LLLQLRAPQKCQGYWMLSIAFYILAGVVLLYCQAAIYRLTYVIAGAFALLSAHQSLWILW 974
            :|.:|...:    |::.::..::|:...|:|.....|.:..|:...|        .|:|:
pombe  1061 MLPRLNDVE----YYINNVFLFLLSFYSLIYGAEKPYLIHNVVGLYF--------FWLLF 1108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGAP1NP_572245.1 PGAP1 79..324 CDD:285110 89/281 (32%)
SPAC824.02NP_593441.1 PGAP1 151..399 CDD:285110 90/286 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 112 1.000 Domainoid score I1581
eggNOG 1 0.900 - - E1_KOG3724
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004158
OrthoInspector 1 1.000 - - oto101542
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15495
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R151
SonicParanoid 1 1.000 - - X2907
TreeFam 1 0.960 - -
98.990

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