DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL35 and rpmC

DIOPT Version :10

Sequence 1:NP_572243.1 Gene:RpL35 / 31483 FlyBaseID:FBgn0029785 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_417771.1 Gene:rpmC / 947807 ECOCYCID:EG10887 Length:63 Species:Escherichia coli


Alignment Length:61 Identity:19/61 - (31%)
Similarity:34/61 - (55%) Gaps:1/61 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIVMHQK 64
            :|..|||.|..:||..:|..|..|..:||: :...|...:...::.||:.:|||..::::|
E. coli     1 MKAKELREKSVEELNTELLNLLREQFNLRM-QAASGQLQQSHLLKQVRRDVARVKTLLNEK 60

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL35NP_572243.1 Ribosomal_L29 7..63 CDD:459954 17/55 (31%)
rpmCNP_417771.1 RpmC 1..63 CDD:440025 19/61 (31%)

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