DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL35 and AT3G55170

DIOPT Version :9

Sequence 1:NP_001284900.1 Gene:RpL35 / 31483 FlyBaseID:FBgn0029785 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_001319756.1 Gene:AT3G55170 / 824683 AraportID:AT3G55170 Length:123 Species:Arabidopsis thaliana


Alignment Length:122 Identity:74/122 - (60%)
Similarity:91/122 - (74%) Gaps:0/122 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIVMHQKQ 65
            |.::|..|||.|.|.:|:.||.|||.||.||||||||||||:|||||:||||:||:|..|..|||
plant     1 MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQ 65

  Fly    66 KENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFAVK 122
            |..||:.:||||..|||||.|||||||:.|:...|:.||.:|.:|...||.||:|:|
plant    66 KSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYAIK 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL35NP_001284900.1 Ribosomal_L29 7..64 CDD:279204 38/56 (68%)
AT3G55170NP_001319756.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 74 1.000 Domainoid score I3226
eggNOG 1 0.900 - - E1_COG0255
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31432
Inparanoid 1 1.050 138 1.000 Inparanoid score I1807
OMA 1 1.010 - - QHG53927
OrthoDB 1 1.010 - - D1468839at2759
OrthoFinder 1 1.000 - - FOG0001124
OrthoInspector 1 1.000 - - otm2768
orthoMCL 1 0.900 - - OOG6_100532
Panther 1 1.100 - - O PTHR45722
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1108
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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