DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL35 and rpl35

DIOPT Version :9

Sequence 1:NP_001284900.1 Gene:RpL35 / 31483 FlyBaseID:FBgn0029785 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_775340.1 Gene:rpl35 / 192299 ZFINID:ZDB-GENE-020419-2 Length:123 Species:Danio rerio


Alignment Length:123 Identity:81/123 - (65%)
Similarity:94/123 - (76%) Gaps:0/123 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIVMHQKQ 65
            |.|:|..:||.|.|:||.||||:||.||..||||||||||.|||||||||||:||||..|::|.|
Zfish     1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQ 65

  Fly    66 KENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFAVKA 123
            ||||||.:|.|||||||||.|||||||:.|:..:.|..|.|..||..::..|||||||
Zfish    66 KENLRKFYKGKKYKPLDLRPKKTRAIRRQLTKHEENLMTKKMQRKSRLYSIRKFAVKA 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL35NP_001284900.1 Ribosomal_L29 7..64 CDD:279204 40/56 (71%)
rpl35NP_775340.1 Ribosomal_L29 8..63 CDD:307121 40/54 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595544
Domainoid 1 1.000 75 1.000 Domainoid score I9057
eggNOG 1 0.900 - - E1_COG0255
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31432
Inparanoid 1 1.050 147 1.000 Inparanoid score I4377
OMA 1 1.010 - - QHG53927
OrthoDB 1 1.010 - - D1468839at2759
OrthoFinder 1 1.000 - - FOG0001124
OrthoInspector 1 1.000 - - oto39816
orthoMCL 1 0.900 - - OOG6_100532
Panther 1 1.100 - - LDO PTHR45722
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1132
SonicParanoid 1 1.000 - - X1108
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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