DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4119 and AT1G60200

DIOPT Version :9

Sequence 1:NP_001284899.1 Gene:CG4119 / 31481 FlyBaseID:FBgn0028474 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_176226.3 Gene:AT1G60200 / 842315 AraportID:AT1G60200 Length:899 Species:Arabidopsis thaliana


Alignment Length:1041 Identity:246/1041 - (23%)
Similarity:393/1041 - (37%) Gaps:321/1041 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PPRAPMPPFMNTAIPPPHIMQNMAKPPRSFRNSATISS-----QPTVYQRP---PEPQPQFR--- 57
            ||.| |||......|.|:  ..|.:|....|...||.:     :|.:...|   |...|..|   
plant   131 PPGA-MPPHGLLRYPSPY--PTMVRPGFIMRPPGTIGAVQLAPRPLIPGMPGLRPVMPPMVRPAS 192

  Fly    58 --------GPIITVFVGNISERVPEALLKRILNACGVVIN--------WKRVSTFGFCEFDGPIA 106
                    .|..|:::|.|: .|....:..||..||.|.:        .|:...|||.||:....
plant   193 LPFVTPAEKPQTTIYIGKIA-TVENDFMMSILEFCGHVKSCLRAEDPTTKKPKGFGFYEFESAEG 256

  Fly   107 AMRAVRLLSEMEIDGKKLVAKVDAKNKVLIEDYKEQECKNGDRSNPVDEKTEDEFAIAQMHEFLE 171
            .:||:|||::..|||::|:..|:...|..:..|.|::.:..                        
plant   257 ILRAIRLLTQRTIDGQELLVNVNQATKEYLLKYVEKKIETA------------------------ 297

  Fly   172 EHKHEFEGFDSSSRADLYGSANRNKKTRREEDIKMKVLSENTLEEEKRNLISSEIGKFRMRAEED 236
                                    ||.:..:..|.........|::|.....:|.||        
plant   298 ------------------------KKAKESQGTKENQAEGPESEQDKLESADNETGK-------- 330

  Fly   237 EHRKELEKEKEKEKLAASKEKERKKQRE-MERMSSTSKSGSSSTAAASSSSATATSSTPAADGAD 300
            :...::::..:....|...::||:..|| ||::.:..:.       ...|:.......|.|||:.
plant   331 DGESKIKENIDIANSAVLTDEEREADREAMEKIETAIEE-------RLKSNPLPPPPPPPADGSG 388

  Fly   301 MSDKTDKESVAVVIKETVKESKESASSTGRKESSSAA--IEITQKERRSDSKETRRRRSKSRSKD 363
            |              |...:||:..|:|....|.:||  :|.:.:..|.|:.          |.|
plant   389 M--------------EFAFKSKDGDSNTDVARSDAAANDVETSGEHNRPDTS----------SPD 429

  Fly   364 RERERERELRELRDKERERER-DRERERERERNEMRERERNEMREREREREREREREEKLLKPVR 427
            ..:..:|..||..:||:|.:| :||.||||.|             :|||:.|:.|..|:      
plant   430 WSKRNDRRSRERGEKEQEMDRYEREAERERSR-------------KEREQRRKLEDAER------ 475

  Fly   428 DTWREKEMEDELRDRKKAEKKAREKEIAYQTRLTDWEVREKRKAKENEKYRLKELLRQEERETDA 492
                                       ||||||..||.||:.|.||      ::..:::|:|.:.
plant   476 ---------------------------AYQTRLRQWERREREKEKE------RQYEKEKEKEKER 507

  Fly   493 KRLKE--FVEDYDDERDDS--LYYRGRELQQRLAERVREADADSKDREKEAEELAELKSKFFSGE 553
            ||.||  :.|:.:::.|||  .::|. .|.:|...::||.:.|..||.||.||:||.|.   |.|
plant   508 KRKKEIRYEEEEEEDDDDSRRRWHRA-ALDERRRRQLREKEDDLADRLKEEEEVAEAKR---SAE 568

  Fly   554 YENPSLEFEKARLEIEKLYEPRILINVNQEPPAAATSSVHQRKQAASAPGEDDEGQKQRQKSQQL 618
            .:|         |:.::|...|||                        .|:...|.:..|.|   
plant   569 EQN---------LQQQQLDALRIL------------------------SGQAAIGSETVQTS--- 597

  Fly   619 DSYDPDMAGTNDDDSISNDDRASMADTASNASGVYAKNNNNDQSLSNSLSRHNSESRDSLAQIHT 683
                          .|.||.:|::.....:|:..:|.:           ...|....:|:|    
plant   598 --------------PIENDHKATLQTVGESANEHHAAD-----------FEENGSGNESMA---- 633

  Fly   684 PTQSAILNDQESGHDAILPSATPPMTMPLISLTLGNNL--KKKKIEATGVFVNDDDNDENINPKK 746
                   .|..||.:|..||.           .||..|  ..|:.....||..:|:::.....|.
plant   634 -------IDNNSGSEAHAPSK-----------KLGFGLVGSGKRTSVPSVFYEEDEDEARKAKKM 680

  Fly   747 RKLVPLDYD---------DNISNTTPSNHAASSGSGAANNSSSSNNNNSSSADRQSSAVSAATAA 802
            :.|||:||.         ....||.|  |.|.:...|...||::....:...::|.|..|     
plant   681 KPLVPIDYSTEEQEAVAHGGSGNTPP--HLALAAEFAKRISSTNPKEETIETEKQRSRRS----- 738

  Fly   803 AAAVSQKIAQAFGGGSSGSGSGSGSGSNASGGKNNGGGSSSSSNNKHNSNSKHGKNEAAASAGSS 867
                                            .:...........:.:.:....::.....:|.:
plant   739 --------------------------------HDKASHRDRERERERDRDRDRVRDRGDGHSGPT 771

  Fly   868 ADAAAANIKKDENGAKVYDEKRRHIKSIIDRIPTQKEELFNYKLDRNEIDSGLMERKIRPWINKK 932
            .||      |:...||:.|.|....|.:||.||..||:||:|:::....|...:..::||||:||
plant   772 KDA------KESGKAKIIDTKFLDAKQLIDTIPKTKEDLFSYEINWAMYDKHQVHERMRPWISKK 830

  Fly   933 IIEYIGEPEPTLVDFICSKVLAGSPPQSILDDVQMVLDEEAEVFVVKMWRLLIYELDAKKSGLAG 997
            |:|::||.|.||||||.|..........:|:.:|.:||||||:||:||||:||:|:...::|:..
plant   831 IMEFLGEEEATLVDFIVSNTQQHVQASQMLELLQSILDEEAEMFVLKMWRMLIFEIKRVEAGVPV 895

  Fly   998 K 998
            |
plant   896 K 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4119NP_001284899.1 RRM_RBM25 62..136 CDD:240892 26/81 (32%)
PWI 917..988 CDD:214609 35/70 (50%)
AT1G60200NP_176226.3 Cytadhesin_P30 <87..201 CDD:284643 18/72 (25%)
RRM_RBM25 204..286 CDD:240892 26/82 (32%)
PTZ00341 <277..447 CDD:173534 43/256 (17%)
PWI 815..888 CDD:214609 36/72 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 77 1.000 Domainoid score I3127
eggNOG 1 0.900 - - E1_KOG2253
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 184 1.000 Inparanoid score I1422
OMA 1 1.010 - - QHG59586
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003333
OrthoInspector 1 1.000 - - oto4048
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3224
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.920

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