DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4119 and RBM25

DIOPT Version :9

Sequence 1:NP_001284899.1 Gene:CG4119 / 31481 FlyBaseID:FBgn0028474 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_067062.1 Gene:RBM25 / 58517 HGNCID:23244 Length:843 Species:Homo sapiens


Alignment Length:1073 Identity:355/1073 - (33%)
Similarity:500/1073 - (46%) Gaps:310/1073 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSYPPRAPMPPF----MNTAIPPPHIM---------QNMAKPPRSFRNSATISSQPTVYQ----- 47
            ||:||....||.    :...||||...         ..|...|.|....|.....|||..     
Human     1 MSFPPHLNRPPMGIPALPPGIPPPQFPGFPPPVPPGTPMIPVPMSIMAPAPTVLVPTVSMVGKHL 65

  Fly    48 --RPPEPQPQFR------GPIITVFVGNISERVPEALLKRILNACGVVINWKRV-------STFG 97
              |...|..:.:      ||..|||||||||:..:.|::::|..||:|::||||       ..||
Human    66 GARKDHPGLKAKENDENCGPTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFG 130

  Fly    98 FCEFDGPIAAMRAVRLLSEMEIDGKKLVAKVDAKNKVLIEDYK-EQECKNG---------DRSNP 152
            |||:..|.:.:||:|||.:::|..|||:.|||||.|..::::| :::..||         |....
Human   131 FCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKKKASNGNARPETVTNDDEEA 195

  Fly   153 VDEKTE--DEFAIAQMHEFLEEHKHEFEGFDSSSRADLYGSANRNKKTRREEDIKMK-------- 207
            :||:|:  |:.....:...:.|:..|...  .|..:|   |..|.||..::|||..:        
Human   196 LDEETKRRDQMIKGAIEVLIREYSSELNA--PSQESD---SHPRKKKKEKKEDIFRRFPVAPLIP 255

  Fly   208 ---VLSEN----TLEEEKRNLISSEIGKFR---MRAEEDEHRKELEKEK-EKEKLAASKEKERKK 261
               :..|:    .:||:||:|||.||.|||   .:.||::.:||.|::: |||:    :|:||::
Human   256 YPLITKEDINAIEMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKER----RERERER 316

  Fly   262 QREMERMSSTSKSGSSSTAAASSSSATATSSTPAADGADMSDKTDKESVAVVIKETVKESKESAS 326
            :||.||                                               :|..:|.:....
Human   317 ERERER-----------------------------------------------RERERERERERE 334

  Fly   327 STGRKESSSAAIEITQKERRSD-----SKETRRRRSKSRSKDRERERERELRELRDKERERERDR 386
            ....||        .::||..|     :||..|.|.:.|.:||:|||..:..:.|.:.||:.|||
Human   335 REKEKE--------RERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDR 391

  Fly   387 ERERERERNEMRERERNEMREREREREREREREEKLLKPVRDTWREKEM-EDELRDRKKAEKKAR 450
            ||||||||...|||||...||||||||||||||.:     :|..|::|. |::..:|:|.|:|.|
Human   392 ERERERERERERERERERERERERERERERERERE-----KDKKRDREEDEEDAYERRKLERKLR 451

  Fly   451 EKEIAYQTRLTDWEVREKRKAKENEKYRLKELLRQEERETDAKRLKEFVEDYDDERDDSLYYRGR 515
            |||.|||.||.:||:||::|.:|.||...:|..|:.|...:|||||||:|||||:|||..||||.
Human   452 EKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGS 516

  Fly   516 ELQQRLAERVREADADSKDREKEAEELAELKSKFFSGEYENPSLEFEKARLEIEKLYEPRILINV 580
            .||:||.:|.:|.:||.:||::|.|||.|::.:..:..:.:|..|.::...|.|:..:|:|    
Human   517 ALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQI---- 577

  Fly   581 NQEPPAAATSSVHQRKQAASAPGEDDEGQKQRQKSQQLDSYDPDMAGTNDDDSISNDDRASMADT 645
            .|||.:.......|.|:.     :.:|..::.::.:|.....|.:.            ..|.|.:
Human   578 KQEPESEEEEEEKQEKEE-----KREEPMEEEEEPEQKPCLKPTLR------------PISSAPS 625

  Fly   646 ASNASGVYAKNNNNDQSLSNSLSRHNSESRDSLAQIHTPTQSAILNDQESGHDAILPSATPPMTM 710
            .|:|||....|...|:|....:..|.:.......:.|.|...                       
Human   626 VSSASGNATPNTPGDESPCGIIIPHENSPDQQQPEEHRPKIG----------------------- 667

  Fly   711 PLISLTLG--------NNLKKKKIEATGVFVNDDDNDENINPKKRKLVPLDYDDNISNTTPSNHA 767
              :||.||        |::|:||:....||...:|.|.:..|:|||||||||.::..|.|     
Human   668 --LSLKLGASNSPGQPNSVKRKKLPVDSVFNKFEDEDSDDVPRKRKLVPLDYGEDDKNAT----- 725

  Fly   768 ASSGSGAANNSSSSNNNNSSSADRQSSAVSAATAAAAAVSQKIAQAFGGGSSGSGSGSGSGSNAS 832
                .|..|.                                                       
Human   726 ----KGTVNT------------------------------------------------------- 731

  Fly   833 GGKNNGGGSSSSSNNKHNSNSKHGKNEAAASAGSSADAAAANIKKDENGAKVYDEKRRHIKSIID 897
                                                                 :|||:||||:|:
Human   732 -----------------------------------------------------EEKRKHIKSLIE 743

  Fly   898 RIPTQKEELFNYKLDRNEIDSGLMERKIRPWINKKIIEYIGEPEPTLVDFICSKVLAGSPPQSIL 962
            :|||.|.|||.|.||.:.:||.||||:|||||||||||||||.|.|||||:||||:|.|.|||||
Human   744 KIPTAKPELFAYPLDWSIVDSILMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSSPQSIL 808

  Fly   963 DDVQMVLDEEAEVFVVKMWRLLIYELDAKKSGL 995
            |||.||||||||||:||||||||||.:|||.||
Human   809 DDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGL 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4119NP_001284899.1 RRM_RBM25 62..136 CDD:240892 39/80 (49%)
PWI 917..988 CDD:214609 60/70 (86%)
RBM25NP_067062.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30 10/28 (36%)
RRM_RBM25 87..169 CDD:409880 39/81 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..202 7/30 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..243 7/28 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 280..442 74/225 (33%)
Necessary for nuclear speckle localization 285..644 151/443 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 498..688 61/235 (26%)
PWI 763..836 CDD:214609 61/72 (85%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146092
Domainoid 1 1.000 287 1.000 Domainoid score I1587
eggNOG 1 0.900 - - E1_KOG2253
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 360 1.000 Inparanoid score I2208
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59586
OrthoDB 1 1.010 - - D378934at33208
OrthoFinder 1 1.000 - - FOG0003333
OrthoInspector 1 1.000 - - oto88619
orthoMCL 1 0.900 - - OOG6_103133
Panther 1 1.100 - - LDO PTHR18806
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1872
SonicParanoid 1 1.000 - - X3224
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.890

Return to query results.
Submit another query.