DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pop1 and SPAC25B8.16

DIOPT Version :9

Sequence 1:NP_572236.3 Gene:Pop1 / 31475 FlyBaseID:FBgn0026702 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_594476.1 Gene:SPAC25B8.16 / 2541548 PomBaseID:SPAC25B8.16 Length:698 Species:Schizosaccharomyces pombe


Alignment Length:769 Identity:170/769 - (22%)
Similarity:282/769 - (36%) Gaps:228/769 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KVEYDAALGGRVTLPSHVTTYHYAAEALQEIRNLVADCQETTQRSSKLIFQTLPKHMRRRAMSHH 69
            :||..|...|.|.|...:.:..:...|||:.      .:.:.:.|::..||.||:.:||||.||:
pombe    27 EVESPALSNGAVDLKKFIESRSFEITALQDA------MKRSKESSAQRAFQALPRCLRRRAASHN 85

  Fly    70 PKRLPR--KYRQAHKSQMGKSGNQPVNGKRPSR-KYRRRPKNLMR-------------------- 111
            .||:|:  :.|..::.|:..|...|:   .||| :.:|..|.|.|                    
pombe    86 IKRIPKGLRDRALYEMQLSSSSTLPI---APSRQRLKRFIKRLRRKLAKSGETKAIDSTGSLVTD 147

  Fly   112 -------------------EYVRRQRRHVWLETHIWHAKRFHMVDRWGHRLPYASCDKTYRACYR 157
                               ::..||.|.|||.||:|..||.||::.||:.:|....:|:||..:|
pombe   148 NSTDDSRIPSLAAVKLIRGKFAGRQLRKVWLPTHLWVCKRAHMINAWGYAIPEKPTEKSYRPTHR 212

  Fly   158 AS-AEHCLLQDISFYGCVELRGPLDMLREGFARLTSPQCGLGITARTFLSGRREGSVELFEDGRY 221
            |: .:..:..|:|:.....:.||.:.|:|.|.  .|...||   ...||:..|..:..|.:...:
pombe   213 AAFRKDAIAFDMSYEPLFCISGPYEALKEKFG--NSFANGL---PPVFLNSSRSFTSYLVKSDIH 272

  Fly   222 PYGALQRASFMWRPRREEEDEKQ---TNHT----LWLWLHPSGAQAVLNQLISVFQLKSTRQQKL 279
               .|....|:......|:|:||   .|.|    |.:.||||......|.|..:           
pombe   273 ---ELICPCFLQWNNPTEDDKKQIPVKNPTECVQLVIRLHPSAFLQAWNYLSGI----------- 323

  Fly   280 PLNEAVTEEKMDVDKIEPVELSKETSPGKKNSKKKPEQRPLRFWTKTKAFDPQPSYFNSDGTLHL 344
                ||.::::                            .:..|....|      .|:..|....
pombe   324 ----AVLDDRI----------------------------AMHDWRLDLA------SFDIHGPDSN 350

  Fly   345 VLLQREFNRFRLTGPRAQKVLFASLRPHREEELQDKANYCQAALQLSSPAELLSNLVMAHLVVDP 409
            ::|.:.|:...|  ..|.||            .|..:||..|.|.:.:.   :|...:.:...|.
pombe   351 IMLHKVFDDVEL--DEAGKV------------WQSISNYSSACLPMGAS---ISVKALVNTRCDK 398

  Fly   410 RLQRPKKRTKAVGKMEQPPLSAGDLLMN----QPKSLPESPLWSKKARERLAKGIMSAHKYDQLR 470
            .|....:::.........|.||.....:    :.:.:|...::..|.|          |.:::..
pombe   399 NLSEKGEKSLLDSAENSLPASANQYSTHFRYWERQEIPSFAVFENKNR----------HTHEKKS 453

  Fly   471 EQHAVVPGAPCAFEQQMQALPVILIQRPGSQDPRYKRLGYGCGWDVIAPAGYGMTLWLTLTMW-- 533
            .:..|:| ....:.::...|.|||                  .||      |...:|..: |:  
pombe   454 SEKEVIP-VYITYRKEWNGLTVIL------------------PWD------YAKFVWRKM-MYQK 492

  Fly   534 GARPGGLRELDSVAREAGA---EIHLPDTLAG----VQRAAASADELRARYFRMPPNKRTNYRKL 591
            |.|.|||..|..:|.|...   .|..|||::|    .:|...:.|..:    |.||.||.||:|.
pombe   493 GIRFGGLENLHQIAFEKRMPFFPIDYPDTISGQLCEEERKKRNEDSWK----RRPPAKRVNYQKF 553

  Fly   592 A-----VVSPFTAPWRHLVRDWRASFSSASEGSSFYVLRHRQQLEEIVESIRHRSPLPQTLPDDA 651
            .     :.:||...|.:                          |.|:|::.|......|      
pombe   554 GDNFSEIGNPFCCDWVY--------------------------LNEMVKASRDEDKTLQ------ 586

  Fly   652 IIQIQLQLLSRGHVKDNALI-CLPTAADHKKRWRQL--KHNDQAPVHVEPTQPD 702
            ::::|:||:.||.::|.|.| ||  :.|...:|:.:  |.|..|...:.|..|:
pombe   587 LVRVQVQLVQRGSLQDRARIYCL--SDDELSKWKTIIYKENLTAENLLYPKCPN 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pop1NP_572236.3 POP1 33..178 CDD:284413 49/187 (26%)
POPLD 514..600 CDD:285393 30/99 (30%)
SPAC25B8.16NP_594476.1 POP1 43..234 CDD:284413 51/199 (26%)
POPLD 473..567 CDD:285393 33/122 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3322
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 129 1.000 Inparanoid score I1431
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004822
OrthoInspector 1 1.000 - - oto101950
orthoMCL 1 0.900 - - OOG6_103108
Panther 1 1.100 - - LDO PTHR22731
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R951
SonicParanoid 1 1.000 - - X3405
TreeFam 1 0.960 - -
109.940

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