DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pop1 and POP1

DIOPT Version :9

Sequence 1:NP_572236.3 Gene:Pop1 / 31475 FlyBaseID:FBgn0026702 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_001139332.1 Gene:POP1 / 10940 HGNCID:30129 Length:1024 Species:Homo sapiens


Alignment Length:996 Identity:280/996 - (28%)
Similarity:437/996 - (43%) Gaps:232/996 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LPSHVTTYHYAAEALQEIRNLVADCQETTQRSS-KLIFQTLPKHMRRRAMSHHPKRLPRKYRQAH 81
            :|.::|...:|.....||..::   :..||:|| .|:|||||:|||||||||:.|||||:.::..
Human    98 IPKYITASTFAQARAAEISAML---KAVTQKSSNSLVFQTLPRHMRRRAMSHNVKRLPRRLQEIA 159

  Fly    82 KSQMGKSGNQ-PVNGKRPSRKYRRRPKNLMREYVRRQRRHVWLETHIWHAKRFHMVDRWGHRLPY 145
            :.:..|:.:| ..:.|....|.||...|...|:.|||::::|||||||||||||||.:||:.|..
Human   160 QKEAEKAVHQKKEHSKNKCHKARRCHMNRTLEFNRRQKKNIWLETHIWHAKRFHMVKKWGYCLGE 224

  Fly   146 ASCDKTYRACYRASAEHCLLQDISFYGCVELRGPLDMLREGFARLTSPQCGLGITARTFLSGRRE 210
            ....|::||||||....|||||:|:|.|:||:|..:.:.:..:.:.:...||...|...|||:|:
Human   225 RPTVKSHRACYRAMTNRCLLQDLSYYCCLELKGKEEEILKALSGMCNIDTGLTFAAVHCLSGKRQ 289

  Fly   211 GSVELFEDGRYPYGALQRASFMWRPRREEEDEKQTNHTLWLWLHPSGAQAVLNQLISVFQLKSTR 275
            ||:.|:...:||...|...:|:|:.:|...|..::.. ||:||||:..|.:|.      ::|:..
Human   290 GSLVLYRVNKYPREMLGPVTFIWKSQRTPGDPSESRQ-LWIWLHPTLKQDILE------EIKAAC 347

  Fly   276 QQKLPLNEAV---------TEEKMDVDKIEPVELSKETSPGKKNSKK------KPEQRPLRFWTK 325
            |...|:..||         ::||      ...||..| ..|||..:|      ||.::.:...|:
Human   348 QCVEPIKSAVCIADPLPTPSQEK------SQTELPDE-KIGKKRKRKDDGENAKPIKKIIGDGTR 405

  Fly   326 TKAFDPQPSYFNSDGTLHLVL--LQREFNRFRLTGPRAQKVLFASLR--------------PHRE 374
                ||...|.....|..:::  |..|.|||||.||.:..:|..:::              |||.
Human   406 ----DPCLPYSWISPTTGIIISDLTMEMNRFRLIGPLSHSILTEAIKAASVHTVGEDTEETPHRW 466

  Fly   375 -----EELQDKANYC--QAALQL----SSPAELLSNLVMAHLVVDPRLQRPKKRTKAVGKMEQPP 428
                 ::....:.:|  :|..:|    :||||:.:..::...|.|||:..|:|::||:..    |
Human   467 WIETCKKPDSVSLHCRQEAIFELLGGITSPAEIPAGTILGLTVGDPRINLPQKKSKALPN----P 527

  Fly   429 LSAGD-------LLMNQPKSLPESPLWSKKARERLAKGIMSAHKYDQLREQHAVVPGAPCAFEQQ 486
            ....|       ||...|.....|.:|::...:.:.:..:|....:::|.: .:|||:.......
Human   528 EKCQDNEKVRQLLLEGVPVECTHSFIWNQDICKSVTENKISDQDLNRMRSE-LLVPGSQLILGPH 591

  Fly   487 MQALPVILIQRPG---SQDPRYKRLGYGCGWDVIAPAGYGMTLWLTLTMWGARPGGLREL---DS 545
            ...:|::|||:||   .:|    |||:|.||||:.|.|:||..|:.....|.|.|||:|.   ..
Human   592 ESKIPILLIQQPGKVTGED----RLGWGSGWDVLLPKGWGMAFWIPFIYRGVRVGGLKESAVHSQ 652

  Fly   546 VAREAGAEIHLPDTLAGVQRAAASADELRARYFRMPPNKRTNYRKLAVVSPFTAPWRHLVRDWRA 610
            ..|........||..||:..|...|..|..:|.|.||.||.||.||..::||..||..|.:||.:
Human   653 YKRSPNVPGDFPDCPAGMLFAEEQAKNLLEKYKRRPPAKRPNYVKLGTLAPFCCPWEQLTQDWES 717

  Fly   611 --------SFSSASEGSSFYVLR------------------------HRQQLEEIVESIRHRSPL 643
                    |.:|:..|....:.|                        |.::.||::::....|..
Human   718 RVQAYEEPSVASSPNGKESDLRRSEVPCAPMPKKTHQPSDEVGTSIEHPREAEEVMDAGCQESAG 782

  Fly   644 PQTLPDD---------------------------------------------------------- 650
            |:.:.|.                                                          
Human   783 PERITDQEASENHVAATGSHLCVLRSRKLLKQLSAWCGPSSEDSRGGRRAPGRGQQGLTREACLS 847

  Fly   651 -------AIIQIQLQLLSRGHVKDNALICLPTAADHKKRWRQLKHND------QAPVHVEPTQPD 702
                   |::.:.|.|||:|..:.:.:||:|.    |:.:.|| |.|      |...|.:|.:  
Human   848 ILGHFPRALVWVSLSLLSKGSPEPHTMICVPA----KEDFLQL-HEDWHYCGPQESKHSDPFR-- 905

  Fly   703 LNEQLRKELRQSHKLKLKRLRSRRVREKRRLQETATKRVHIRPANTAHLVRGQLQEMCRLW---L 764
                 .|.|:|..|.|         ||||:....|:..   .||. ...|.||......||   |
Human   906 -----SKILKQKEKKK---------REKRQKPGRASSD---GPAG-EEPVAGQEALTLGLWSGPL 952

  Fly   765 PTDPAELRDSVRRQCSRQVFGYVSTAGFSFTEALVCAVGYVTPAGLQQLIEELPASKGNRKQPPL 829
            |        .|...|||.:.|:|:...||.......|:|:|:..||..::...||::..      
Human   953 P--------RVTLHCSRTLLGFVTQGDFSMAVGCGEALGFVSLTGLLDMLSSQPAAQRG------ 1003

  Fly   830 MCLVRDADSRDYRWASFQVNL 850
            :.|:|...|..||:|...:.:
Human  1004 LVLLRPPASLQYRFARIAIEV 1024

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pop1NP_572236.3 POP1 33..178 CDD:284413 72/146 (49%)
POPLD 514..600 CDD:285393 34/88 (39%)
POP1NP_001139332.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..95
POP1 107..257 CDD:399753 73/152 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 365..399 11/40 (28%)
POPLD 617..708 CDD:400475 35/90 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 722..762 4/39 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 773..792 3/18 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 819..838 0/18 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 911..936 10/37 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165145630
Domainoid 1 1.000 98 1.000 Domainoid score I7231
eggNOG 1 0.900 - - E1_KOG3322
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41000
Inparanoid 1 1.050 324 1.000 Inparanoid score I2500
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG50054
OrthoDB 1 1.010 - - D341931at33208
OrthoFinder 1 1.000 - - FOG0004822
OrthoInspector 1 1.000 - - oto91346
orthoMCL 1 0.900 - - OOG6_103108
Panther 1 1.100 - - LDO PTHR22731
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R951
SonicParanoid 1 1.000 - - X3405
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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