DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc-c and Cetn1

DIOPT Version :9

Sequence 1:NP_001245533.1 Gene:Mlc-c / 31474 FlyBaseID:FBgn0004687 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_445913.1 Gene:Cetn1 / 84592 RGDID:620246 Length:172 Species:Rattus norvegicus


Alignment Length:138 Identity:47/138 - (34%)
Similarity:81/138 - (58%) Gaps:5/138 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EEFQEAFNLFDNRGDGKIQLSQVGECLRALGQNPTESDVKKCTHQLKPDE--RISFEVFLPIYQA 78
            :|.:|||:|||:.|.|.|.:.::...:||||..|.:.::||...::..:.  :|||..||.:  .
  Rat    31 QEVREAFDLFDSDGSGTIDVKELKVAMRALGFEPRKEEMKKMISEVDKEATGKISFNDFLAV--M 93

  Fly    79 ISKARSGDTADDFIEGLRHFDKDASGYISSAELRHLLTTLGEKLTDEEVEQLLANME-DQQGNIN 142
            ..|....||.::.::..|.||.|.:|.||...|:.:...|||.|||||:::::...: |..|.:|
  Rat    94 TQKMAEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGESLTDEELQEMIDEADRDGDGEVN 158

  Fly   143 YEEFVRMV 150
            .|||::::
  Rat   159 EEEFLKIM 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc-cNP_001245533.1 PTZ00184 14..152 CDD:185504 47/138 (34%)
Cetn1NP_445913.1 PTZ00183 15..172 CDD:185503 47/138 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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