DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mlc-c and calml4

DIOPT Version :10

Sequence 1:NP_001245533.1 Gene:Mlc-c / 31474 FlyBaseID:FBgn0004687 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001011117.1 Gene:calml4 / 496530 XenbaseID:XB-GENE-5936220 Length:153 Species:Xenopus tropicalis


Alignment Length:139 Identity:49/139 - (35%)
Similarity:73/139 - (52%) Gaps:5/139 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LEEFQEAFNLFDNRGDGKIQLSQVGECLRALGQNPTESDVKK--CTHQLKPDERISFEVFLPIYQ 77
            :::|:|.|:|:|.:|.|||....:...:|.||..||..:|.:  ..|::..|..:.|..||.|..
 Frog    10 IQKFKECFSLYDKKGKGKIPAGDLLTVMRCLGTCPTPGEVTRHLQVHKIGKDGEVDFSTFLTIMY 74

  Fly    78 AISKARSGDTADDFIEGLRHFDKDASGYISSAELRHLLTTLGEKLTDEEVEQLLANME-DQQGNI 141
            ...|..  |..::.:..:...||...|.|...|||..||.:|||||.|||:.||..:: ...|.:
 Frog    75 RQQKQE--DPENEIMVAMLMSDKQKKGVIPLKELRAKLTQMGEKLTPEEVDDLLKGVKVGPDGMV 137

  Fly   142 NYEEFVRMV 150
            .||||||.:
 Frog   138 KYEEFVRQI 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc-cNP_001245533.1 PTZ00184 14..152 CDD:185504 49/139 (35%)
calml4NP_001011117.1 PTZ00184 1..144 CDD:185504 47/135 (35%)

Return to query results.
Submit another query.