DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc-c and cabp5a

DIOPT Version :10

Sequence 1:NP_001245533.1 Gene:Mlc-c / 31474 FlyBaseID:FBgn0004687 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_956992.1 Gene:cabp5a / 393671 ZFINID:ZDB-GENE-040426-1655 Length:165 Species:Danio rerio


Alignment Length:147 Identity:43/147 - (29%)
Similarity:77/147 - (52%) Gaps:12/147 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LEEFQEAFNLFDNRGDGKIQLSQVGECLRALGQNPTESDVKKCTHQLKPD--ERISFEVFLPIYQ 77
            :||.:||||.||...||.|....:|..:|.:|..|||.::.:....:..:  .|:.||.|:   :
Zfish    21 IEELREAFNEFDKDKDGLISCKDLGNLMRTMGYMPTEMELIELGQNINMNLGGRVDFEDFV---E 82

  Fly    78 AISKARSGDTA-----DDFIEGLRHFDKDASGYISSAELRHLLT-TLGEKLTDEEVEQLLANMED 136
            .::.....:||     .:..:..:.||.|..|.|::.|||..:| .|||.:...|::.::...::
Zfish    83 LMTPKLLAETAGMIGVKELRDAFKEFDMDGDGAITTEELRCAMTKLLGEHMNRREIDAVVREADN 147

  Fly   137 Q-QGNINYEEFVRMVMS 152
            . .|.:::||||:|:.|
Zfish   148 NGDGTVDFEEFVKMLSS 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc-cNP_001245533.1 PTZ00184 14..152 CDD:185504 42/145 (29%)
cabp5aNP_956992.1 PTZ00184 15..164 CDD:185504 42/145 (29%)

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