DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and RGD1

DIOPT Version :10

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_009819.1 Gene:RGD1 / 852563 SGDID:S000000464 Length:666 Species:Saccharomyces cerevisiae


Alignment Length:417 Identity:83/417 - (19%)
Similarity:157/417 - (37%) Gaps:78/417 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 LANARDGSYFVRRSPQSDGYYTLSLRFNKRPKHYKLLYKPGVGHYLRGQDKR------FDTVHDM 154
            ::|.||...|:.:..|: |.::|.:..|..|..||  ..|.:.|   ||..:      .|...:.
Yeast   290 VSNERDLYSFLNKYNQT-GKHSLLINKNLIPVSYK--KHPSMNH---GQKNKSPPKFAVDPSRNS 348

  Fly   155 VADGLINFHMQLHASPIIQQINQ--QTKNCYQQSPYMTLNGRK---------LRALSNELG---- 204
            :...:|:.|   :.||.:...:.  ...|....|...:||..|         :.:.||..|    
Yeast   349 IPKRMISTH---NESPFLSSSSNTAAVPNANLNSATPSLNTNKQLPPTMASSISSTSNAAGAMSP 410

  Fly   205 --KAAAKESKESPAEEKEQKQEEPPPPAVDPMPLVYEKPHHFKVHTFKGLNWCEFCANFLWGFTA 267
              .....::..|..:..:.....|..|......|..::|                          
Yeast   411 SSSIVTSDTTSSITKTLDPGNNSPQIPEELINSLDSDRP-------------------------- 449

  Fly   268 QGVKCEACGFVAHSKCSELVPPKCVPDLKRIRGVFGTDLTTMVQLEPHHQIPFVVRRCVEEVEAR 332
                      ::|.:.:..:||....:.|    .||..|.::::.| ...:|.:||:|:..::..
Yeast   450 ----------ISHIQTNNNMPPGVQKNFK----TFGVPLESLIEFE-QDMVPAIVRQCIYVIDKF 499

  Fly   333 GMLQEGIYRVSGFADEIEALKLALDREGEKTDM----SETAYGNVNVIAGTLKLYLRLLPVPLIT 393
            |:.||||||.|....::..||..:|::.....|    ...:..::.::...||.:...||..::.
Yeast   500 GLDQEGIYRKSANVLDVSKLKEEIDKDPANISMILPSKPHSDSDIYLVGSLLKTFFASLPDSVLP 564

  Fly   394 FQAYPSFMAAGRTGKQAEQRQLMAEAVRRLPPAHHSCLQYMLEHLKRVASHYAVNKMNEHNLATV 458
            ...........:......::..|...:..||.|.:..|:.::.|||||.:|.|.|:||...|..:
Yeast   565 KALSSEIKVCLQIEDPTTRKNFMHGLIYNLPDAQYWTLRALVFHLKRVLAHEAQNRMNLRALCII 629

  Fly   459 FAPTLI-ATPQHMTNLTEEIFMLSSLI 484
            :.||:. |.|....::..:|..:..|:
Yeast   630 WGPTIAPANPDDANDVNFQIMAMEVLL 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215 18/75 (24%)
C1_CHN 241..293 CDD:410356 4/51 (8%)
RhoGAP_chimaerin 302..491 CDD:239837 46/188 (24%)
RGD1NP_009819.1 F-BAR_Rgd1 39..268 CDD:153336
RhoGAP_fRGD1 470..663 CDD:239863 46/188 (24%)
Blue background indicates that the domain is not in the aligned region.

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