DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and RGA2

DIOPT Version :10

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_010667.1 Gene:RGA2 / 851985 SGDID:S000002787 Length:1009 Species:Saccharomyces cerevisiae


Alignment Length:459 Identity:99/459 - (21%)
Similarity:176/459 - (38%) Gaps:106/459 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 LEAEQLLANARDGSYFVRRSPQSDGYYT-LSLRFNKRPKHYKLLYKPGVGHYLRGQDKRFDTVHD 153
            ||.:....:|.|.|   ..|.:.|.|:| |:||      ..||..:.     |.|..|:.  :.|
Yeast   597 LEDDSTKVDATDES---ATSLEKDFYFTELTLR------KLKLDVRE-----LEGTKKKL--LQD 645

  Fly   154 MVADGLINFHMQLHASPIIQQINQQTKNCYQQSPYMTLNGRKLRALSNELGKAAAKESKESPAEE 218
            :.       :::|....::..::..|:...:||    .:.|:.......:..:...:|..|.::.
Yeast   646 VE-------NLRLAKERLLNDVDNLTREKDKQS----ASSRESLEQKENIATSITVKSPSSNSDR 699

  Fly   219 KEQKQEEPPPPAVDPMPLVYEKPHHFKV------HTFKGLNWCEFCANFLWGFTAQGVKCEACGF 277
            |.......|            ||..:|:      |....|...:...|...|.|..         
Yeast   700 KGSISNASP------------KPRFWKIFSSAKDHQVGDLESQQRSPNSSSGGTTN--------- 743

  Fly   278 VAHSKCS---------ELVPPKCV---PDLKRI------RGVFGTDLTTMVQLEPHHQIPFVVRR 324
            :|..:.|         ||..|..|   |..||:      ..::|:.|......| ...:|.::|.
Yeast   744 IAQKEISSPKLIRVHDELPSPGKVPLSPSPKRLDYTPDGSHLYGSSLQARCAYE-KSTVPIIIRC 807

  Fly   325 CVEEVEAR--GMLQEGIYRVSG---FADEIE---ALKLALDREGEKTDMSETAYGNVNVIAGTLK 381
            |::.:|..  |:..||:||.||   ..:|||   |...:|..:.....::.....:::.:|..||
Yeast   808 CIDRIEKDDIGLNMEGLYRKSGSQTLVEEIENEFAQNNSLHSDTLSPKLNALLNQDIHAVASVLK 872

  Fly   382 LYLRLLPVPLITFQAYPSFMAAGRTGKQAEQRQL---------------------MAEAVRRLPP 425
            .|||.||.|:::|..|.:.:...|..:..|:..|                     :.|..:.||.
Yeast   873 RYLRKLPDPVLSFSIYDALIDLVRNNQLIERLPLNNDKFLDSPQKVTIYEMVLKSLLEIFKILPV 937

  Fly   426 AHHSCLQYMLEHLKRVASHYAVNKMNEHNLATVFAPTLIAT---PQHMTNLTEEIFMLSSLITHC 487
            .|...|:.:..|:.:|......|.||.|||:.||||:||..   .:.:.::.|..:::..::.:.
Yeast   938 EHQEVLKVLAAHIGKVRRCSERNLMNLHNLSLVFAPSLIHDFDGEKDIVDMKERNYIVEFILGNY 1002

  Fly   488 KTIF 491
            :.||
Yeast  1003 RDIF 1006

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215 18/76 (24%)
C1_CHN 241..293 CDD:410356 13/69 (19%)
RhoGAP_chimaerin 302..491 CDD:239837 53/220 (24%)
RGA2NP_010667.1 LIM1_Rga 13..67 CDD:188780
LIM2_Rga 70..123 CDD:188781
RhoGAP 815..1002 CDD:214618 46/186 (25%)
Blue background indicates that the domain is not in the aligned region.

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