DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and si:dkey-33c9.6

DIOPT Version :10

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_073764425.1 Gene:si:dkey-33c9.6 / 795086 ZFINID:ZDB-GENE-130530-592 Length:828 Species:Danio rerio


Alignment Length:204 Identity:74/204 - (36%)
Similarity:112/204 - (54%) Gaps:14/204 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 FVAHSKCSELVPPKCVPDLKRIRGVFGTDLTTMVQLEPHHQIPFVVRRCVEEVEARGMLQEGIYR 341
            :|.|    .|.||...|.|:  ..||...: ..|.::....:|.:||.||||||.||:.:|||||
Zfish   604 YVPH----PLEPPSTTPILQ--EPVFCVPI-GQVAMQESVLVPHIVRSCVEEVERRGLKEEGIYR 661

  Fly   342 VSGFADEIEALKLALD---REGEKTDMSETAYGNVNVIAGTLKLYLRLLPVPLITFQAYPSFMAA 403
            :||.:.||:|||.|.:   ||.    :|:....:||.::||||||.|.||:|||..:.:.....|
Zfish   662 ISGASTEIQALKYAFNTNYREA----VSKLRSVDVNAVSGTLKLYFRELPLPLIPCEHFSELSDA 722

  Fly   404 GRTGKQAEQRQLMAEAVRRLPPAHHSCLQYMLEHLKRVASHYAVNKMNEHNLATVFAPTLIATPQ 468
            ........:...:...::.||..:.:.|.::|.||:|||.....|||:..||||||.|:|:..|.
Zfish   723 LDIADPFVRADSLLSLLQSLPDVNRNTLLFLLHHLRRVAERKEENKMSLSNLATVFGPSLLRPPV 787

  Fly   469 HMTNLTEEI 477
            ...::::|:
Zfish   788 SRVDISQEV 796

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215
C1_CHN 241..293 CDD:410356 5/15 (33%)
RhoGAP_chimaerin 302..491 CDD:239837 66/179 (37%)
si:dkey-33c9.6XP_073764425.1 None
Blue background indicates that the domain is not in the aligned region.

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