DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and Gmip

DIOPT Version :10

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_030099716.1 Gene:Gmip / 78816 MGIID:1926066 Length:1002 Species:Mus musculus


Alignment Length:342 Identity:91/342 - (26%)
Similarity:142/342 - (41%) Gaps:61/342 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 RKLRALSNELGKAAAKESK-ESPAEEKEQKQEEPPPPAVDPMPLVYEKPHH----------FKVH 247
            |.|.:.::..|..|.:..| .|...|.....||..|...|.:......|..          .::.
Mouse   444 RSLDSPTSSPGAGARRLVKASSTGTESSDDFEERDPDLGDGIENGVGSPFRKWTLSTAAQTHRLR 508

  Fly   248 TFKGLNWCEFCANFLWGFTAQGVKCEACGFVAHSKCSELVPPKCVPDLKRI---RGVFGTDLTTM 309
            ..:|...|..|..|:    ..|.:||.|....|.:|.|.:...|  ..:|:   ..:||.|...:
Mouse   509 RLRGPAKCRECEAFM----VSGTECEECFLTCHKRCLETLLILC--GHRRLPARMSLFGVDFLQL 567

  Fly   310 VQLEPHHQIPFVVRRCVEEVEARGMLQEGIYRVSGFADEIEALKLALDREGEKTDMSETAYGN-V 373
            .:..| .::|||:.||..|:|.|.:..:|||||||....:|.|..|.:......::|    || .
Mouse   568 PRDFP-EEVPFVITRCTAEIEHRALGLQGIYRVSGSRVRVERLCQAFENGRALVELS----GNSP 627

  Fly   374 NVIAGTLKLYLRLLPVPLITFQAYPSFMAAGRT-----GKQAEQRQLMAEAVR-------RLPPA 426
            :.|...||.:|:.|..|::.|..|.:|::..:|     |..........|.:|       :||.:
Mouse   628 HDITSVLKRFLQELTDPVVPFHLYDAFISLAKTLHADPGDDPGTPNPSPEIIRSLKTLLVQLPDS 692

  Fly   427 HHSCLQYMLEHLKRVASHYAVNKMNEHNLATVFAPTLIATPQ-----------------HMTNLT 474
            ::|.|::::.||.|||:.:..|||:.:||..||.|||:..|.                 |...|.
Mouse   693 NYSTLRHLVAHLFRVAARFEENKMSANNLGIVFGPTLLRPPDGPRATGASPVACLLDSGHQAQLV 757

  Fly   475 EEIFMLSSLITHCKTIF 491
            |      .||.|.:.||
Mouse   758 E------FLIVHYEQIF 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215
C1_CHN 241..293 CDD:410356 13/61 (21%)
RhoGAP_chimaerin 302..491 CDD:239837 64/218 (29%)
GmipXP_030099716.1 BAR 124..324 CDD:472257
C1_GMIP-like 503..552 CDD:410366 12/54 (22%)
RhoGAP 560..763 CDD:470621 63/213 (30%)
Blue background indicates that the domain is not in the aligned region.

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