DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and Arhgap10

DIOPT Version :9

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_084389.2 Gene:Arhgap10 / 78514 MGIID:1925764 Length:786 Species:Mus musculus


Alignment Length:497 Identity:115/497 - (23%)
Similarity:197/497 - (39%) Gaps:136/497 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 EQLLANARDGSYFVRRSPQS----DGYYTLSLRFNKRPKHY-----------KLLYKPGVGHYLR 142
            |||.|...:...|.:.:.::    |.:.|||.|  |:..|.           :..|:..:.:..:
Mouse   122 EQLGAVKEEKKKFDKETEKNYSLIDKHLTLSAR--KKDSHLQEADLQVEQNRQHFYELSLEYVCK 184

  Fly   143 GQD----KRFDTVHDMVA--DGLINFHMQLHA-------SPIIQQIN-QQTKNCYQQSPYMTLNG 193
            .|:    |:|:.|..|::  .|:..|:.|.|.       ..:..||| |.|:|.::.:      .
Mouse   185 LQEIQERKKFEFVEPMLSFFQGMFTFYHQGHELSKDFNHYKMELQINIQNTRNRFEGT------R 243

  Fly   194 RKLRALSNELGKAAAKESKESPAEEKEQK----------QEEPPPPA----VDPMPLVYEKPHHF 244
            .::..|.|::        :::|.::|...          ||:.|.|.    |....:..:....|
Mouse   244 SEVEELMNKI--------RQNPKDQKRASQFTAEGYLYVQEKRPAPFGSSWVKHYCMYRKTAKKF 300

  Fly   245 KVHTFKG-------------LNWC----------EFCANF-----------LWGFTAQGVK--CE 273
            .:..|:.             |..|          .||.:.           :..|:.:..|  .|
Mouse   301 NMIPFEHRSGGKLGDGEAFFLKECTKRHMDSTDRRFCFDIEAADRPGVPLTVQAFSEEERKQWLE 365

  Fly   274 ACG---FVAHSKCSELVPPKCVPDLKRIRGVFGTDLTTMVQLEPHHQIPF-VVRRCVEEVEARGM 334
            |.|   .:.|:....:||        |..|  |..|..|         .| ::|:|:..||.||:
Mouse   366 ALGGKEALFHTFNRAIVP--------RPEG--GAQLDKM---------GFTILRKCISAVETRGI 411

  Fly   335 LQEGIYRVSGFADEIE-ALKLALD-REGEKTDMSETAYGNVNVIAGTLKLYLRLLPVPLITFQAY 397
            ..:|:|||.|.:.::: .|.:.:| :...:.|:..:|...|..:...||.|||.||.||:|::.:
Mouse   412 NDQGLYRVVGVSSKVQRLLSMLMDVKMCNELDLENSADWEVKTVTSALKQYLRSLPEPLMTYELH 476

  Fly   398 PSFMAAGRTGKQAEQRQLMAEAVRRLPPAHHSCLQYMLEHLKRVASHYAVNKMNEHNLATVFAPT 462
            ..|:...::|....:...:...|.:||..:...|..:::||..|:||...|.|...||..||.||
Mouse   477 RDFIVPAKSGSPESRVNAIHFLVHKLPEKNKEMLDILVKHLTNVSSHSKQNLMTVANLGVVFGPT 541

  Fly   463 LIATPQHMT----------NLTEEIFMLSSLITHCKTIFATS 494
            |: .||..|          |:..||     ||.:.:.||.||
Mouse   542 LM-RPQEETVAAIMDLKFQNIVVEI-----LIENHEKIFRTS 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215 20/93 (22%)
C1_1 242..294 CDD:278556 14/90 (16%)
RhoGAP_chimaerin 302..491 CDD:239837 58/201 (29%)
Arhgap10NP_084389.2 BAR 19..225 CDD:299863 22/104 (21%)
BAR-PH_GRAF_family 267..372 CDD:269953 16/104 (15%)
PH 269..367 CDD:278594 14/97 (14%)
RhoGAP_Graf 367..569 CDD:239839 64/226 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 584..609
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 622..714
SH3_GRAF2 732..785 CDD:212998
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1094
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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