DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoGAP5A and Arhgap21

DIOPT Version :10

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_006497601.1 Gene:Arhgap21 / 71435 MGIID:1918685 Length:1957 Species:Mus musculus


Alignment Length:333 Identity:86/333 - (25%)
Similarity:135/333 - (40%) Gaps:73/333 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 IQQINQQTKNCYQQSPYMTLNGRKLRALSNELG-KAAAK-ESKESPAEEKEQK---QEEPPPPAV 231
            |::.|....:..:|.|........:|  ...|| |:..| :|..||.||.|:|   :::..||  
Mouse  1063 IKEYNSLLSSKTEQLPKTPRQSLSIR--QTLLGAKSEPKTQSPHSPKEESERKLLSKDDTSPP-- 1123

  Fly   232 DPMPLVYEKPHHFKVHTFKGLNWCEFCANFLWGFTAQGVKCEACGFVAHSKCSELVPPKCVPDLK 296
                            ..|| .|                                  .:.:|.:.
Mouse  1124 ----------------KDKG-TW----------------------------------RRGIPSIV 1137

  Fly   297 R--------IRGVFGTDLTTMVQLEPHHQIPFVVRRCVEEVEARGMLQEGIYRVSGFADEIEALK 353
            |        ..|.||..|........:..||.:|..|.:.||.||:...|||||.|....|.:::
Mouse  1138 RKTFEKKPAATGTFGVRLDDCPPAHTNRYIPLIVDICCKLVEERGLEYTGIYRVPGNNAAISSMQ 1202

  Fly   354 LALDREGEKTDMSETAYGNVNVIAGTLKLYLRLLPVPLITFQAYPSFMAAGRTGKQAEQRQLMAE 418
            ..|::.....|:.:..:.::|||:..||.:.|.||.||.|...|..|:.|.|.....::.:.:..
Mouse  1203 EELNKGMADIDIQDDKWRDLNVISSLLKSFFRKLPEPLFTNDKYADFIEANRKEDPLDRLRTLKR 1267

  Fly   419 AVRRLPPAHHSCLQYMLEHLKRVASHYAVNKMNEHNLATVFAPTLIATPQ----HM-TNLTEEIF 478
            .:..||..|...|:::..|||.||.:...|||...|||.||.|||:.|.:    || |::.::..
Mouse  1268 LIHDLPEHHFETLKFLSAHLKTVAENSEKNKMEPRNLAIVFGPTLVRTSEDNMTHMVTHMPDQYK 1332

  Fly   479 MLSSLITH 486
            ::.:||.|
Mouse  1333 IVETLIQH 1340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215
C1_CHN 241..293 CDD:410356 3/51 (6%)
RhoGAP_chimaerin 302..491 CDD:239837 62/190 (33%)
Arhgap21XP_006497601.1 PDZ_ARHGAP21_23-like 55..163 CDD:467238
PH_ARHGAP21-like 938..1047 CDD:269955
RhoGAP_ARHGAP21 1150..1345 CDD:239860 62/191 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.