DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and arhgap12a

DIOPT Version :10

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_021336423.1 Gene:arhgap12a / 563267 ZFINID:ZDB-GENE-050809-38 Length:853 Species:Danio rerio


Alignment Length:513 Identity:122/513 - (23%)
Similarity:213/513 - (41%) Gaps:128/513 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PRNTEAGAGNANTGGSGGVGGAPEPSSPVQKVWKPELYKLQLEAPAPCPLRCQRTLPLPPAKSTA 66
            |::|:.|:.::::..         ||||     ||.      .:|:.   :| .||.:.......
Zfish   444 PQDTKTGSPDSDSSC---------PSSP-----KPP------HSPSE---KC-ATLNMTKITEHG 484

  Fly    67 EAVEANNLAGRLYGSEYHGLMGHLEAEQLLANARD--GSYFVRRSPQSDGYYTLSLR-------- 121
            :.|..|      :.|.:..|.|.|    |:.|...  ||.:..|..:|...|::.|:        
Zfish   485 KKVRKN------WTSYWTVLQGSL----LIFNKGQGGGSGWFGRDQKSSVEYSVDLKGGSVDWAS 539

  Fly   122 FNKRPKHYKLLYKPGVGHYLRGQDKRFDTVHDMVADGLIN-FHMQLHASPIIQQINQQTKNCYQQ 185
            .:|..|.:.|..|...|..|..|..         :|||:| :|..|            |:..:  
Zfish   540 KDKSSKKHVLELKTRQGTELLLQSD---------SDGLVNDWHKAL------------TEAIH-- 581

  Fly   186 SPYMTLNGRKLRALSNELGKAAAKESKESPAEEKEQKQEEPPPPAVDPMPLVYEKPHHFKVHTFK 250
             .||.           |..:|..::..|||..||..|::              ::.:..|....|
Zfish   582 -TYMW-----------ESDEAIEEDMPESPENEKHDKEK--------------DRKNSKKARDIK 620

  Fly   251 GLNWCEFCANFLWGFTAQGVKCEACGFVAHSKCSELV------PP-KCVPDLKRIRG-VFGTDLT 307
                                |..:.......|.::||      |. :.|.|...|:. |||..|:
Zfish   621 --------------------KTASMDNAEQKKKNKLVVLLLGRPTLQAVKDKGYIKDQVFGCSLS 665

  Fly   308 TMVQLEPHHQIPFVVRRCVEEVEARGMLQEGIYRVSGFADEIEALKLALDREGEKTDMSETAYGN 372
            ::.|.| :..:|..|..|:|:||..|:..:|:|||||....|:.|:.|::.| ||.|:.::.:.:
Zfish   666 SLCQRE-NSTVPRFVWLCIEQVEKNGLGVDGLYRVSGNLAIIQKLRFAVNHE-EKIDLGDSKWED 728

  Fly   373 VNVIAGTLKLYLRLLPVPLITFQAYPSFMAAGRTGKQAEQRQLMAEAVRRLPPAHHSCLQYMLEH 437
            ::|..|.||::.|.||.||.|:..:..|::|.:.....::.|.:.:.:::||..:|..:|.:.:|
Zfish   729 IHVTTGALKMFFRELPEPLFTYTFFSDFISAIKMPDYKQKVQTVKDLMKKLPRPNHDTIQVLFKH 793

  Fly   438 LKRVASHYAVNKMNEHNLATVFAPTL----IATPQHMTNLTEEIFMLSSLITHCKTIF 491
            ||:|..|...|:|...::|.||.|||    |.|.....::..:..::..::....|||
Zfish   794 LKKVIQHVDENRMTTQSVAIVFGPTLLRPEIETANMAVHMVYQNQIVELILMEYDTIF 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215 24/101 (24%)
C1_CHN 241..293 CDD:410356 7/58 (12%)
RhoGAP_chimaerin 302..491 CDD:239837 58/192 (30%)
arhgap12aXP_021336423.1 SH3_ARHGAP12 11..70 CDD:213003
SH3-WW_linker 67..233 CDD:435468
WW 252..278 CDD:459800
PRP40 253..>331 CDD:227435
PH_ARHGAP9-like 470..580 CDD:270053 31/144 (22%)
RhoGAP_ARHGAP27_15_12_9 660..846 CDD:239868 57/187 (30%)
Blue background indicates that the domain is not in the aligned region.

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