DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and RhoGAP100F

DIOPT Version :10

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001163786.1 Gene:RhoGAP100F / 43758 FlyBaseID:FBgn0039883 Length:1866 Species:Drosophila melanogaster


Alignment Length:521 Identity:130/521 - (24%)
Similarity:195/521 - (37%) Gaps:145/521 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RNTEA---------GAG--NANTG-------------GSGGVGGAPEPSSPVQKVWKPELYKLQL 43
            ||||:         |.|  :.|.|             .|..:|||....||..:..: :|.:|..
  Fly   682 RNTESIYSSRNHILGTGTLDRNMGLTRPISALPVRSMSSQHIGGAGSIRSPSIRRMR-QLLELSA 745

  Fly    44 ---------------EAPAPCPLRCQRTLPLP-------PA-----KSTAEAVEANNLAGRLYGS 81
                           ::|||.|   ..|||.|       ||     |.....|:...::|.|:  
  Fly   746 GPASPSGSILSTGGHQSPAPTP---SATLPRPHRQIDINPAEFAKYKLDKPIVDIGGISGMLW-- 805

  Fly    82 EYHGLMGHLEAEQLLANARDGSYFVRRSPQSDGYYTLSLRFNKRPKHYKLLYKPGVGHYLRGQDK 146
                  .||.|.:.|..|.:|:.......|:...|.: :..::..|...:         :|..|.
  Fly   806 ------IHLLAGRGLRTAPEGAAGTATQGQTRDLYCV-IECDRVHKARTV---------VRSGDL 854

  Fly   147 RFDTVHDMVADGLINFHMQLHASPIIQQINQQTKNCYQQSPYMTLNGRKLRALSNELGKAAAKES 211
            :||.......|.:.|  .||...........:.|.||          |...:||:.|        
  Fly   855 QFDWDESFELDLVGN--KQLDVLVYSWDPQHRHKLCY----------RGAISLSSIL-------- 899

  Fly   212 KESPAEEKEQKQEEPPPPAVDPMPLVYEKPHHFKVHTFKGLNWCEFCANFLWGFTAQGVKCEACG 276
            ::||..:...|        |:|...:|.:..|               .:.|..:..:|:.....|
  Fly   900 RQSPLHQLALK--------VEPRGTIYIRMRH---------------TDPLALYKRRGLPSLRAG 941

  Fly   277 FVAHSKCSELVPPKCVPDLKRIRGVFGTDLTTMVQLEPHH-----QIPFVVRRCVEEVEARGMLQ 336
            :               |.|      ||.||.|:|..|..:     .:|.|:||||||||.||:..
  Fly   942 Y---------------PTL------FGADLETVVNRESKNAPGSAPVPIVLRRCVEEVERRGLDI 985

  Fly   337 EGIYRVSGFADEIEALKLALDREGEKTDMSETAYGNVNVIAGTLKLYLRLLPVPLIT---FQAYP 398
            .|:||:.|.|.:...|:.|.:|.....:::.....::|||.|.||.|||.||.||.|   ||...
  Fly   986 IGLYRLCGSATKKRLLREAFERNSRAVELTPEHVPDINVITGVLKDYLRELPEPLFTRCLFQMTV 1050

  Fly   399 SFMAAGRTGKQAEQRQLMAEAVRRLPPAHHSCLQYMLEHLKRVASHYAVNKMNEHNLATVFAPTL 463
            ..:|...........:||...:..||.|:.:.|.::|:||..|.|:...|||:...||||..|.|
  Fly  1051 DALAVCLPDDPEGNAKLMLSILDCLPRANRATLVFLLDHLSLVVSNSERNKMSAQALATVMGPPL 1115

  Fly   464 I 464
            :
  Fly  1116 M 1116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215 17/90 (19%)
C1_CHN 241..293 CDD:410356 4/51 (8%)
RhoGAP_chimaerin 302..491 CDD:239837 64/171 (37%)
RhoGAP100FNP_001163786.1 PDZ_Par6-like 178..261 CDD:467202
C2 804..905 CDD:175973 27/138 (20%)
RhoGAP_SYD1 946..1144 CDD:239844 64/171 (37%)
DUF5585 1349..>1604 CDD:465521
Blue background indicates that the domain is not in the aligned region.

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