DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and RhoGAP100F

DIOPT Version :9

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001163786.1 Gene:RhoGAP100F / 43758 FlyBaseID:FBgn0039883 Length:1866 Species:Drosophila melanogaster


Alignment Length:521 Identity:130/521 - (24%)
Similarity:195/521 - (37%) Gaps:145/521 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RNTEA---------GAG--NANTG-------------GSGGVGGAPEPSSPVQKVWKPELYKLQL 43
            ||||:         |.|  :.|.|             .|..:|||....||..:..: :|.:|..
  Fly   682 RNTESIYSSRNHILGTGTLDRNMGLTRPISALPVRSMSSQHIGGAGSIRSPSIRRMR-QLLELSA 745

  Fly    44 ---------------EAPAPCPLRCQRTLPLP-------PA-----KSTAEAVEANNLAGRLYGS 81
                           ::|||.|   ..|||.|       ||     |.....|:...::|.|:  
  Fly   746 GPASPSGSILSTGGHQSPAPTP---SATLPRPHRQIDINPAEFAKYKLDKPIVDIGGISGMLW-- 805

  Fly    82 EYHGLMGHLEAEQLLANARDGSYFVRRSPQSDGYYTLSLRFNKRPKHYKLLYKPGVGHYLRGQDK 146
                  .||.|.:.|..|.:|:.......|:...|.: :..::..|...:         :|..|.
  Fly   806 ------IHLLAGRGLRTAPEGAAGTATQGQTRDLYCV-IECDRVHKARTV---------VRSGDL 854

  Fly   147 RFDTVHDMVADGLINFHMQLHASPIIQQINQQTKNCYQQSPYMTLNGRKLRALSNELGKAAAKES 211
            :||.......|.:.|  .||...........:.|.||          |...:||:.|        
  Fly   855 QFDWDESFELDLVGN--KQLDVLVYSWDPQHRHKLCY----------RGAISLSSIL-------- 899

  Fly   212 KESPAEEKEQKQEEPPPPAVDPMPLVYEKPHHFKVHTFKGLNWCEFCANFLWGFTAQGVKCEACG 276
            ::||..:...|        |:|...:|.:..|               .:.|..:..:|:.....|
  Fly   900 RQSPLHQLALK--------VEPRGTIYIRMRH---------------TDPLALYKRRGLPSLRAG 941

  Fly   277 FVAHSKCSELVPPKCVPDLKRIRGVFGTDLTTMVQLEPHH-----QIPFVVRRCVEEVEARGMLQ 336
            :               |.|      ||.||.|:|..|..:     .:|.|:||||||||.||:..
  Fly   942 Y---------------PTL------FGADLETVVNRESKNAPGSAPVPIVLRRCVEEVERRGLDI 985

  Fly   337 EGIYRVSGFADEIEALKLALDREGEKTDMSETAYGNVNVIAGTLKLYLRLLPVPLIT---FQAYP 398
            .|:||:.|.|.:...|:.|.:|.....:::.....::|||.|.||.|||.||.||.|   ||...
  Fly   986 IGLYRLCGSATKKRLLREAFERNSRAVELTPEHVPDINVITGVLKDYLRELPEPLFTRCLFQMTV 1050

  Fly   399 SFMAAGRTGKQAEQRQLMAEAVRRLPPAHHSCLQYMLEHLKRVASHYAVNKMNEHNLATVFAPTL 463
            ..:|...........:||...:..||.|:.:.|.::|:||..|.|:...|||:...||||..|.|
  Fly  1051 DALAVCLPDDPEGNAKLMLSILDCLPRANRATLVFLLDHLSLVVSNSERNKMSAQALATVMGPPL 1115

  Fly   464 I 464
            :
  Fly  1116 M 1116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215 17/90 (19%)
C1_1 242..294 CDD:278556 4/51 (8%)
RhoGAP_chimaerin 302..491 CDD:239837 64/171 (37%)
RhoGAP100FNP_001163786.1 PDZ_signaling 177..260 CDD:238492
C2 804..905 CDD:175973 27/138 (20%)
RhoGAP_SYD1 946..1144 CDD:239844 64/171 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443409
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46684
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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