DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and Pkc98E

DIOPT Version :10

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster


Alignment Length:341 Identity:76/341 - (22%)
Similarity:120/341 - (35%) Gaps:87/341 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 PAEEKEQKQEEPPPPAVDPMP----LVYEKPHHFKVHTFKGLNWCEFCANFLWGFTAQGVKCEAC 275
            |....||      |..|:.:|    .....||.|.||::|...:|:.|.:.|:|...||::||.|
  Fly   227 PGMRDEQ------PAKVEMVPAGQRFNVNLPHRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCETC 285

  Fly   276 GFVAHSKCSELVPPKCVPDLKRIRGVFGTDLTTMVQLEPHHQIPFVVRRCVEEVEARGMLQEG-- 338
            |...|.:|.:.|...|..:.|::     .::.:.:.:.|..|.|   ||      ::.:.|:|  
  Fly   286 GMNVHKRCQKNVANTCGINTKQM-----AEILSSLGISPDKQQP---RR------SKYLNQQGGE 336

  Fly   339 -IYRVSGFAD-------EIEALKLALDREGEKT-------------DMSETAYGNVNVIAGTLKL 382
             .|..|..||       ...:..|::|.....|             .::.|..|.|.....|...
  Fly   337 DNYGASLGADGDGAPGQSFRSCALSVDSLATSTTTMTSGYNSSSCMSLAVTGSGGVGATGETRPG 401

  Fly   383 YLRLLPVPLITFQAYPSF---MAAGRTG-----------KQA------------EQRQLMAEAVR 421
            ...||....|......||   |.|.:.|           |.|            |:|.|...|..
  Fly   402 KCSLLDFNFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKKDAIIQDDDVDCTMTEKRILALAANH 466

  Fly   422 RLPPAHHSCLQ------YMLEHLKRVASHYAVNKMN--EHNLATVFAP--TLIATPQHMTNLTEE 476
            ....|.|||.|      :::|::......:.:.|..  |.:.|..:|.  ||.....|...:...
  Fly   467 PFLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASRAAFYAAEVTLALQFLHTHGVIYR 531

  Fly   477 IFMLSSLIT----HCK 488
            ...|.:::.    |||
  Fly   532 DLKLDNILLDQEGHCK 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215
C1_CHN 241..293 CDD:410356 20/51 (39%)
RhoGAP_chimaerin 302..491 CDD:239837 49/250 (20%)
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385 1/2 (50%)
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388 20/53 (38%)
STKc_nPKC_epsilon 412..729 CDD:270743 28/136 (21%)
Blue background indicates that the domain is not in the aligned region.

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