DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and ralbp1

DIOPT Version :10

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_996963.1 Gene:ralbp1 / 404612 ZFINID:ZDB-GENE-040426-2098 Length:665 Species:Danio rerio


Alignment Length:459 Identity:105/459 - (22%)
Similarity:167/459 - (36%) Gaps:129/459 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 LPPAKSTAEAVEANNLAG--RLYGSE------YHGLMGHLEAEQLLANARDGSYFVRRSPQSDGY 115
            |||:.|.||...|.:..|  |...||      :.||.            |.|.    .||..||:
Zfish     6 LPPSSSPAEQRRAEHPGGVARTPSSEEISPTKFPGLY------------RTGD----PSPPHDGH 54

  Fly   116 Y--------TLSLRFNKRPKHYKLLYKPGVGHYLRGQDKRFDTVHDMVADGLINFHMQLHA--SP 170
            :        ......||:...:|...|...|:....:|...|   |..:...:.....:|.  .|
Zfish    55 HHEPPDAASDDEKEHNKKKNKFKKKEKRTEGYAAFQEDSSAD---DAESPSKMKRSKGIHVFKKP 116

  Fly   171 IIQQINQQTKNCYQQSPYMTLNGRKLRALSNELGKAAAKESKESPAEE-----KEQKQEEPPPPA 230
            ...:..::.....::.|              :..||..|:||:..|.:     ||:|:::  .|:
Zfish   117 SFSKKKEKDFKVKEKGP--------------KEEKAKDKKSKDLTAADVVKQWKEKKKKK--KPS 165

  Fly   231 VDPMPLVYEKPHHFKVHTFKGLNWCEFCANFLWGFTAQGVKCEACGFVAHSKCSELVPPKCVPDL 295
            .:|.|::.|....|                                                   
Zfish   166 TEPEPVITEVTVTF--------------------------------------------------- 179

  Fly   296 KRIRGVFGTDLTTMVQ---LEPHHQIPFVVRRCVEEVEARGMLQEGIYRVSGFADEIEALKLALD 357
               |.:||..|...|:   |....|:|.:.|.||:.:|:.||..||||||||...:::.||.|.|
Zfish   180 ---RPIFGASLVEAVRRTALYDGIQLPAIFRECVDYIESYGMKCEGIYRVSGMKSKVDELKAAYD 241

  Fly   358 REGEKTDMSETAYGNVNVIAGTLKLYLRLLPVPLITFQAYPSFMAAGRTGKQAEQRQLMAEAVRR 422
            || |...:.|.   :.:.:|..||.|||.||..|:..:....|..|.....:||:.|.....:..
Zfish   242 RE-ECPCLEEY---DPHTVASLLKQYLRELPDNLLGKELSLRFEEACGRPSEAEKLQEFQRLLTE 302

  Fly   423 LPPAHHSCLQYMLEHLKRVASHYAVNKMNEHNLATVFAPTLIATPQHMTNLTEEIFMLSSLITHC 487
            :|......|.:::.|:..|.:..|..|||..|::.|..||:     .::|....:|     .||.
Zfish   303 VPAGSRLLLAWLITHMDHVIAREADTKMNIQNISIVLNPTI-----QISNRVLYVF-----FTHV 357

  Fly   488 KTIF 491
            :.:|
Zfish   358 REMF 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215 20/106 (19%)
C1_CHN 241..293 CDD:410356 1/51 (2%)
RhoGAP_chimaerin 302..491 CDD:239837 59/191 (31%)
ralbp1NP_996963.1 RhoGap_RalBP1 183..364 CDD:239846 60/193 (31%)
Smc 393..>595 CDD:440809
Blue background indicates that the domain is not in the aligned region.

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