DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and Arhgap9

DIOPT Version :10

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_006241526.1 Gene:Arhgap9 / 362893 RGDID:1305342 Length:642 Species:Rattus norvegicus


Alignment Length:237 Identity:76/237 - (32%)
Similarity:113/237 - (47%) Gaps:27/237 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 SKCSELVPPKCVPDLKRI--RG-----VFGTDLTTMVQLEPHHQIPFVVRRCVEEVEARGMLQEG 338
            :|...|:..:  |.|:.:  ||     |||..|.::.|.| ...:|..||.|||.|:.:|:..:|
  Rat   406 NKLKRLIAKR--PTLQSLQERGLFRDQVFGCQLESLCQRE-GDTVPSFVRLCVEAVDKKGLDVDG 467

  Fly   339 IYRVSGFADEIEALKLALDRE---------------GE--KTDMSETAYGNVNVIAGTLKLYLRL 386
            ||||||....::.|:..:|||               |:  |.|:....:.:::||.|.|||:.|.
  Rat   468 IYRVSGNLAVVQKLRFLVDRERAVTSDGRYMFPEQPGQEGKLDLDSAEWDDIHVITGALKLFFRE 532

  Fly   387 LPVPLITFQAYPSFMAAGRTGKQAEQRQLMAEAVRRLPPAHHSCLQYMLEHLKRVASHYAVNKMN 451
            ||.||:.....|.|..|....:.......:.:.:..||..:|..|||:||||.||.:|...|:|.
  Rat   533 LPQPLVPALLLPHFRDALELSEPEHCLSKIQKLIDSLPRPNHDTLQYILEHLCRVIAHSDKNRMT 597

  Fly   452 EHNLATVFAPTLIATPQHMTNLTEEIFMLSSLITHCKTIFAT 493
            .|||..||.|||....|..:::...:.....||......||:
  Rat   598 AHNLGIVFGPTLFRPEQEASDMAAHVVYPGQLIQLMLNNFAS 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215
C1_CHN 241..293 CDD:410356 2/11 (18%)
RhoGAP_chimaerin 302..491 CDD:239837 67/205 (33%)
Arhgap9XP_006241526.1 SH3 27..82 CDD:473055
PH_ARHGAP9-like 227..340 CDD:270053
RhoGAP_ARHGAP27_15_12_9 432..636 CDD:239868 67/204 (33%)
Blue background indicates that the domain is not in the aligned region.

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