DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and Arhgap21

DIOPT Version :10

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001178622.1 Gene:Arhgap21 / 307178 RGDID:1311028 Length:1952 Species:Rattus norvegicus


Alignment Length:352 Identity:86/352 - (24%)
Similarity:139/352 - (39%) Gaps:95/352 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 QQTKNCYQQSPYMT---LNGRKLRALSNELGKA------------------AAK-----ESKESP 215
            |::.|..::...:|   |..|:::..::.|.|.                  .||     :|..||
  Rat  1039 QESSNLNEEDTGVTNRDLISRRIKEYNSLLSKTEQLPKTPRQSLSIRQTLLGAKSEPKTQSPHSP 1103

  Fly   216 AEEKEQK---QEEPPPPAVDPMPLVYEKPHHFKVHTFKGLNWCEFCANFLWGFTAQGVKCEACGF 277
            .||.|:|   :::..||                  ..|| .|                       
  Rat  1104 KEESERKLLSKDDTSPP------------------KDKG-TW----------------------- 1126

  Fly   278 VAHSKCSELVPPKCVPDLKR--------IRGVFGTDLTTMVQLEPHHQIPFVVRRCVEEVEARGM 334
                       .:.:|.:.|        ..|.||..|........:..||.:|..|.:.||.||:
  Rat  1127 -----------RRGIPSIVRKTFEKKPAATGTFGVRLDDCPPAHTNRYIPLIVDICCKLVEERGL 1180

  Fly   335 LQEGIYRVSGFADEIEALKLALDREGEKTDMSETAYGNVNVIAGTLKLYLRLLPVPLITFQAYPS 399
            ...|||||.|....|.:::..|::.....|:.:..:.::|||:..||.:.|.||.||.|...|..
  Rat  1181 EYTGIYRVPGNNAAISSMQEELNKGMADIDIQDDKWRDLNVISSLLKSFFRKLPEPLFTNDKYAD 1245

  Fly   400 FMAAGRTGKQAEQRQLMAEAVRRLPPAHHSCLQYMLEHLKRVASHYAVNKMNEHNLATVFAPTLI 464
            |:.|.|.....::.:.:...:..||..|...|:::..|||.||.:...|||...|||.||.|||:
  Rat  1246 FIEANRKEDPLDRLRTLKRLIHDLPEHHFETLKFLSAHLKTVAENSEKNKMEPRNLAIVFGPTLV 1310

  Fly   465 ATPQ----HM-TNLTEEIFMLSSLITH 486
            .|.:    || |::.::..::.:||.|
  Rat  1311 RTSEDNMTHMVTHMPDQYKIVETLIQH 1337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215
C1_CHN 241..293 CDD:410356 3/51 (6%)
RhoGAP_chimaerin 302..491 CDD:239837 62/190 (33%)
Arhgap21NP_001178622.1 PDZ_ARHGAP21_23-like 52..160 CDD:467238
PHA03247 <576..857 CDD:223021
PH_ARHGAP21-like 936..1045 CDD:269955 2/5 (40%)
RhoGAP_ARHGAP21 1147..1342 CDD:239860 62/191 (32%)
Blue background indicates that the domain is not in the aligned region.

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