DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and Arhgap15

DIOPT Version :9

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001013939.1 Gene:Arhgap15 / 295635 RGDID:1359304 Length:482 Species:Rattus norvegicus


Alignment Length:443 Identity:108/443 - (24%)
Similarity:181/443 - (40%) Gaps:90/443 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 LEAEQLLANAR--DGSYFVRRSPQSDGYYTLS---LRFNKRPKHYKLLYKPGV------------ 137
            :|.|..|..|:  ||...:|:: .|..:..||   |.|.|.||...|   |.|            
  Rat    88 VEKEGYLQKAKIADGGKKLRKN-WSTSWIVLSGRKLEFYKDPKQQAL---PNVKPRPNAESVDLC 148

  Fly   138 GHYLR--GQDKRF-DTVHDMVADGLINFHMQLHASPIIQQINQQTKNCYQQSPYMTLNGRKLRAL 199
            |.::.  .:||.. .:|..:.......|.:|.....:|.......||...:.|.....|      
  Rat   149 GAHIEWAAKDKSSKKSVFQITTASGNEFLLQSDIDFLILDWFHAIKNAIDRLPKNPSFG------ 207

  Fly   200 SNELGKAAAKESKESPA----EEKEQKQEEPPPPAVDPMPLVYEKPHHFKVHTFKGLNWCEFCAN 260
            |.||.......|.|.|:    :.||||.|.             .|...|::|             
  Rat   208 SLELFSFQRSSSSEQPSHCHIDRKEQKPEN-------------RKSFMFRLH------------- 246

  Fly   261 FLWGFTAQGVKCEACGFVAHSKCSELVPPKCVPDLKRIR-------GVFGTDLTTMVQLEPHHQI 318
                   ..|...:......|:..:.:..:  |.||.::       .:||:.|.|:.:.| |..:
  Rat   247 -------HSVSDTSDKNRVKSRLKKFISRR--PSLKTLQEKGIIKDQIFGSHLHTVCERE-HSTV 301

  Fly   319 PFVVRRCVEEVEARGMLQEGIYRVSGFADEIEALKLALDREGEKTDMSETAYGNVNVIAGTLKLY 383
            |:.|::|:|.||.||:..:|||||||....|:.|:..:::| ||.::.::.:.:::|:.|.||::
  Rat   302 PWFVKQCIEAVEKRGLEVDGIYRVSGNLATIQKLRFIVNQE-EKLNLDDSQWEDIHVVTGALKMF 365

  Fly   384 LRLLPVPLITFQAYPSFMAAGRTGKQAEQRQLMAEAVRRLPPAHHSCLQYMLEHLKRVASHYAVN 448
            .|.|..||..:..:..|:.|.:......:.:.|...|:.|||.:|..::.:..||.::.:..|.|
  Rat   366 FRELSEPLFPYSFFERFVEAIKKQDSDAKIETMKSLVKSLPPPNHDTMKILFGHLTKIVAKAAQN 430

  Fly   449 KMNEHNLATVFAPTLIATPQHMTNLTEEI--------FMLSSLITHCKTIFAT 493
            .|:..:|..||.|||:.......|:...:        |||    |....||::
  Rat   431 LMSTQSLGIVFGPTLLRAENESGNVAVHMVYQNQVAEFML----TEYDKIFSS 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215 23/95 (24%)
C1_1 242..294 CDD:278556 4/51 (8%)
RhoGAP_chimaerin 302..491 CDD:239837 58/196 (30%)
Arhgap15NP_001013939.1 PH 88..197 CDD:278594 27/112 (24%)
PH_ARHGAP9-like 89..199 CDD:270053 27/113 (24%)
RhoGAP_ARHGAP27_15_12_9 286..472 CDD:239868 57/191 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1300981at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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