DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and ABR

DIOPT Version :9

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_016880028.1 Gene:ABR / 29 HGNCID:81 Length:1137 Species:Homo sapiens


Alignment Length:509 Identity:131/509 - (25%)
Similarity:199/509 - (39%) Gaps:143/509 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 WKPELYKLQ---LEAPAPCPLRCQ---------RTLPLPPAKSTAEAVEANNLAGRLYGSEYHGL 86
            |:..:.|||   |:|.....:..|         ||:...|..|..:..|:..|.|.|: ...|..
Human   709 WREAIQKLQKKDLQAFVLSSVELQVLTGSCFKLRTVHNIPVTSNKDDDESPGLYGFLH-VIVHSA 772

  Fly    87 MGHLEAEQLLANARDGS--YFVRRSPQSDGYYTLSLRFNKRPKHYKLLYKPGVGHYLRGQDKRFD 149
            .|..::..|.......|  |||.::.      |...|....||                .|:.|:
Human   773 KGFKQSANLYCTLEVDSFGYFVSKAK------TRVFRDTAEPK----------------WDEEFE 815

  Fly   150 TVHDMVADGLINFHMQLHASPIIQQINQQTKNCYQQSPYMTLNGRKLRALSNE-----LGKAAAK 209
                          ::|..|..::.:      ||::....|    |:...:||     :||...:
Human   816 --------------IELEGSQSLRIL------CYEKCYDKT----KVNKDNNEIVDKIMGKGQIQ 856

  Fly   210 ESKESPAEEKEQKQEEPPPPAVDPMPLVYEKPHHFKVHTFKGLNWCEFCANFLWGFTAQGVKCEA 274
                                 :||. .|..|..|..|....|:.     ..|...||::.:..  
Human   857 ---------------------LDPQ-TVETKNWHTDVIEMNGIK-----VEFSMKFTSRDMSL-- 892

  Fly   275 CGFVAHSKCSELVPPKCVPDLKRIRGVFGTDLTTMVQLEPHHQIPFVVRRCVEEVEARGMLQEGI 339
                           |..|. |:..||||..::.:.:.| ..::|::||:||||||.||:.:.||
Human   893 ---------------KRTPS-KKQTGVFGVKISVVTKRE-RSKVPYIVRQCVEEVEKRGIEEVGI 940

  Fly   340 YRVSGFADEIEALKLALD--------REGEKTDMSETAYG----------NVNVIAGTLKLYLRL 386
            ||:||.|.:|:|||...|        ...:.....:..|.          ::|.||||||||.|.
Human   941 YRISGVATDIQALKAVFDASKQLQKLTRADSLAQDDPTYNKDILLMLSDMDINAIAGTLKLYFRE 1005

  Fly   387 LPVPLITFQAYPSFMAAGRTGKQAEQRQLMAEAVRRLPPAHHSCLQYMLEHLKRVASHYAVNKMN 451
            ||.||:|.:.||:||........|.:...|...:|.||..:.....::||||||||....:|||:
Human  1006 LPEPLLTDRLYPAFMEGIALSDPAAKENCMMHLLRSLPDPNLITFLFLLEHLKRVAEKEPINKMS 1070

  Fly   452 EHNLATVFAPTL-----IATPQHMTNLTE--------EIFMLSSLITHCKTIFA 492
            .|||||||.|||     :.:..|:|:..:        ::.:|...:.|....||
Human  1071 LHNLATVFGPTLLRPSEVESKAHLTSAADIWSHDVMAQVQVLLYYLQHPPISFA 1124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215 15/92 (16%)
C1_1 242..294 CDD:278556 7/51 (14%)
RhoGAP_chimaerin 302..491 CDD:239837 76/219 (35%)
ABRXP_016880028.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1094
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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