DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and Myo9a

DIOPT Version :10

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_006511271.1 Gene:Myo9a / 270163 MGIID:107735 Length:2633 Species:Mus musculus


Alignment Length:359 Identity:97/359 - (27%)
Similarity:165/359 - (45%) Gaps:48/359 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 LRGQDKRFDTVHDMV-ADGLINFHMQLHAS-------------------PIIQQINQQTKNCYQ- 184
            |..:|.:.||:.|:| ...|..|...:.:|                   .:.:||.::|....| 
Mouse  1954 LDNEDSKKDTLVDVVFKKALKEFRQNIFSSYSSALAMDDGKSIRYKDLYALFEQILEKTMRLEQR 2018

  Fly   185 ---QSPY-MTLNGRK--LRALSNELGKAAAKESKESPAEEKEQKQEEPPPPAVDPMPLVYE-KPH 242
               :||. :.:|..|  |....||.....:...|....|.|:::::|        ..||.| ..|
Mouse  2019 DWNESPVRVWVNTFKVFLDEYMNEFKTLDSTAPKVLKTERKKRRKKE--------TDLVEEHNGH 2075

  Fly   243 HFKVHTFKGLNWCEFCANFLWGFTAQGVKCEACGFVAHSKCSELVPPKCV----PDLKRIRGVFG 303
            .||...:....:||:|::.:|......| |:.|.:..|.||......||.    |:|...:  ||
Mouse  2076 IFKATQYSIPTYCEYCSSLIWIMDRASV-CKLCKYACHKKCCLKTTAKCSKKYDPELSSRQ--FG 2137

  Fly   304 TDLTTMVQLEPHHQIPFVVRRCVEEVEARGMLQEGIYRVSGFADEIEALKLALDREGEKTDMSET 368
            .:|:.:...:  ..:|.||.:.:..:|..|:..|||||.||..::|:.|:..||.:.|..::.:.
Mouse  2138 VELSRLTSED--RAVPLVVEKLINYIEMHGLYTEGIYRKSGSTNKIKELRQGLDTDAESVNLDDY 2200

  Fly   369 AYGNVNVIAGTLKLYLRLLPVPLITFQAYPSFMAAGRTGKQAEQRQLMAEAVRRLPPAHHSCLQY 433
               |::|||...|.:||.||.||:||:.|..|:.|....::.|..:.:...:.:|...|.:.|:.
Mouse  2201 ---NIHVIASVFKQWLRDLPNPLMTFELYEEFLRAMGLQERKETIRGVYSVIDQLSRTHLNTLER 2262

  Fly   434 MLEHLKRVASHYAVNKMNEHNLATVFAPTLIATP 467
            ::.||.|:|.....|:|:.:.||.||||.::..|
Mouse  2263 LIFHLVRIALQEDTNRMSANALAIVFAPCILRCP 2296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215 8/25 (32%)
C1_CHN 241..293 CDD:410356 15/55 (27%)
RhoGAP_chimaerin 302..491 CDD:239837 53/166 (32%)
Myo9aXP_006511271.1 RA_Myosin-IXa 15..110 CDD:340736
MYSc_Myo9 160..1006 CDD:276836
IQ 1117..1138 CDD:197470
C1_Myosin-IXa 2070..2127 CDD:410433 16/57 (28%)
RhoGAP_myosin_IX 2136..2321 CDD:239842 53/166 (32%)
Blue background indicates that the domain is not in the aligned region.

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