DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and rga7

DIOPT Version :10

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_595866.1 Gene:rga7 / 2540635 PomBaseID:SPBC23G7.08C Length:695 Species:Schizosaccharomyces pombe


Alignment Length:331 Identity:82/331 - (24%)
Similarity:139/331 - (41%) Gaps:47/331 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 ASPIIQQINQQTKNCYQQSPYMTLNGRKLRALSNELGKAAAKESKESPAEEKEQKQEEPPPPAVD 232
            |||:...:...|.|        ..||....:.||    ........|.||.|....::.||..:.
pombe   402 ASPLASTLKPSTAN--------DTNGSSSSSSSN----PRTSSPLASNAENKPPVAQQSPPVLLP 454

  Fly   233 PMPLVYEKPHHFKVHTFKGLNWCEFCANFLWGFTAQGVKCEACGFVAHSKCSELVPPKCVPD--- 294
            .:|.:       :..|.:               |::.|........::...|...|....|.   
pombe   455 TLPPI-------QTTTIQ---------------TSREVAPPPSSINSNRAASPFRPTSVSPQPSS 497

  Fly   295 -LKRIRGVFGTDLTTMVQLEPHHQIPFVVRRCVEEVEARGMLQEGIYRVSGFADEIEALKLALDR 358
             .|.:  :||..|..:: |..|..||.:|.:|..:||..|:..:|||||...:..:..|:...:.
pombe   498 PTKSL--LFGARLDAII-LREHSNIPNIVMQCTSQVENFGLNLQGIYRVPSSSARVNMLRSQFEN 559

  Fly   359 EGEKTDMSETAYGN-VNVIAGTLKLYLRLLPVPLITFQAYPSFMAAGRTGKQAEQRQLMAEAVRR 422
            .......:...|.| |:.:|..||::.|.|..|||.......|:.||....::.:|..:..|:..
pombe   560 NPLLQLHTPEDYENDVHAVADLLKIFFRELREPLIPDNHQRDFIDAGNVEDESRRRDAVHRAIND 624

  Fly   423 LPPAHHSCLQYMLEHLKRVASHYAVNKMNEHNLATVFAPTLI--ATPQHMTNLTEEIFMLSSLIT 485
            ||.|::|.::::..||.::..:..||||:.:|||.::.||:|  ||...:::.:..|   ..||.
pombe   625 LPDANYSTIRHLTIHLAKIKENSDVNKMSTNNLAIIWGPTIIKQATIPEISSFSRTI---EILID 686

  Fly   486 HCKTIF 491
            :|.|||
pombe   687 YCFTIF 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215
C1_CHN 241..293 CDD:410356 5/51 (10%)
RhoGAP_chimaerin 302..491 CDD:239837 57/191 (30%)
rga7NP_595866.1 F-BAR_Rgd1 39..277 CDD:153336
Herpes_BLLF1 <321..>479 CDD:282904 19/110 (17%)
RhoGAP_fRGD1 504..692 CDD:239863 57/191 (30%)
Blue background indicates that the domain is not in the aligned region.

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