DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP5A and Arhgap29

DIOPT Version :9

Sequence 1:NP_727007.1 Gene:RhoGAP5A / 31473 FlyBaseID:FBgn0029778 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001343453.1 Gene:Arhgap29 / 214137 MGIID:2443818 Length:1266 Species:Mus musculus


Alignment Length:488 Identity:129/488 - (26%)
Similarity:199/488 - (40%) Gaps:97/488 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 AKSTAEAVEANNLAGRLY--GSEYHGLMGHLEAEQLLANARDGSY--FVRRSPQSDGYYTL-SLR 121
            |.|.|.::::...:.:||  |.||...:....:.:|.... ||:.  .:..|||:.||... ||.
Mouse   440 AASLANSLQSLCDSAKLYDPGQEYSEFVKATSSSELEEKV-DGNVNKQMTNSPQTSGYEPADSLE 503

  Fly   122 FNKRPKHYKLLYKPGVGHYLRGQDKRFDTVHDMVADGLI---NFHMQLHASPIIQQINQQTKNCY 183
            ...|        .|...|.|  ::.|.....||.....:   .|.|                  :
Mouse   504 DVAR--------LPDSCHKL--EEDRCSNSADMTGPSFVRSWKFGM------------------F 540

  Fly   184 QQSPYMTLNGRKLRALSNEL-------GKAAAKESKESPAEEKEQKQEEPPPPA-VDPMPL-VYE 239
            ..|. .|....:.|:|.:|.       .|.....|..:.:...:..:.|||.|: ..|..| .::
Mouse   541 SDSE-STGGSSESRSLDSESISPGDFHRKLPRTPSSGTMSSADDLDEREPPSPSEAGPNSLGAFK 604

  Fly   240 KPHHFK---VHTFKGL---NWCEFCANFLWGFTAQGVKCEACGFVAHSKCSELVPPKCVPDLKRI 298
            |....|   .|.|:.|   ..|..|...:   ...||:||.|..|.|.||.|.:...|  ..:::
Mouse   605 KTLMSKAALTHKFRKLRSPTKCRDCDGIV---MFPGVECEECLLVCHRKCLENLVIIC--GHQKL 664

  Fly   299 RG---VFGTDLTTMVQLEPHHQIPFVVRRCVEEVEARGMLQEGIYRVSGFADEIEALKLALDREG 360
            :|   :||.:...:.:.|| ..||||::.|..|:|.|.:..:|||||.|...:.|.|..||:...
Mouse   665 QGKMHIFGAEFIQVAKKEP-DGIPFVLKICASEIENRALCLQGIYRVCGNKIKTEKLCQALENGM 728

  Fly   361 EKTDMSETAYGNVNVIAGTLKLYLRLLPVPLITFQAYPSFMAAGRTGKQAEQRQ----------- 414
            ...|:||.:..:   |...||||||.||.|.|.|:.|..|:...:..:...:.|           
Mouse   729 HLVDISEFSSHD---ICDVLKLYLRQLPEPFILFRLYKEFIDLAKEIQHVNEEQEAKKDSPEDKK 790

  Fly   415 -------------LMAEAVRRLPPAHHSCLQYMLEHLKRVASHYAVNKMNEHNLATVFAPTLI-- 464
                         ...:.:|:||.:|.:.|.|::.||:||..|...||||..||..:|.||||  
Mouse   791 HPHVSIEVNRILLKSKDLLRQLPASHFNSLHYLIAHLRRVVDHAEENKMNSKNLGVIFGPTLIRP 855

  Fly   465 ---ATPQHMTNLTE---EIFMLSSLITHCKTIF 491
               ..|..:::|.|   :..::..|||:.:.||
Mouse   856 RPTTAPVTISSLAEYSNQARLVEFLITYSQKIF 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP5ANP_727007.1 SH2_a2chimerin_b2chimerin 75..166 CDD:198215 24/98 (24%)
C1_1 242..294 CDD:278556 17/57 (30%)
RhoGAP_chimaerin 302..491 CDD:239837 68/220 (31%)
Arhgap29NP_001343453.1 BAR 220..436 CDD:325158
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 482..501 5/18 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 542..601 12/59 (20%)
C1 614..659 CDD:197519 15/47 (32%)
RhoGAP 671..883 CDD:295372 67/215 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1039..1081
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1116..1157
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1209..1266
Interaction with PTPN13/PTPL1. /evidence=ECO:0000250 1263..1266
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1453
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1300981at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1094
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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